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sunhwans library [48 articles]

Senaste artiklarna i sunhwans bibliotek.
  • Nitrogen regulation in bacteria and archaea.
    Annual review of microbiology, Vol. 61 (2007), pp. 349-377.
    by JA Leigh, JA Dodsworth
    posted to no-tag by sunhwan on 2008-04-26 01:55:13 as ** along with 1 person fhsantanna
  • Very fast empirical prediction and rationalization of protein pKa values.
    Proteins, Vol. 61, No. 4. (1 December 2005), pp. 704-721.
    by H Li, AD Robertson, JH Jensen
    posted to no-tag by sunhwan on 2008-04-26 01:55:00 as ** along with 4 people and 1 group bicko sim82 barry mschofie Bioinformatics
  • A Tosylimido Analogue of a Nonheme Oxoiron(IV) Complex
    Angewandte Chemie International Edition, Vol. 45, No. 44. (2006), pp. 7394-7397.
    by Eric J Klinker, Timothy A Jackson, Michael P Jensen, Audria Stubna, Gergely Juhász, Emile L Bominaar, Eckard Münck, Lawrence Que
    posted to no-tag by sunhwan on 2008-04-18 01:18:13 as **
  • The generalized Born/volume integral implicit solvent model: Estimation of the free energy of hydration using London dispersion instead of atomic surface area
    Journal of Computational Chemistry, Vol. 9999, No. 9999. (2008), NA.
    by Paul Labute
    posted to no-tag by sunhwan on 2008-04-17 18:39:10 as ** along with 5 people and 1 group sobolevnrm RamuAnandakrishnan middledomain dmobley GermanErlenkamp baker-group
  • PROMALS3D: a tool for multiple protein sequence and structure alignments.
    Nucleic Acids Res (20 February 2008)
    by Jimin Pei, Bong-Hyun H Kim, Nick V V Grishin
    posted to no-tag by sunhwan on 2008-04-17 18:39:05 as ** along with 2 people and 1 group newton1234 sobolevnrm baker-group
  • Towards a molecular dynamics consensus view of B-DNA flexibility
    Nucl. Acids Res., Vol. 36, No. 7. (1 April 2008), pp. 2379-2394.
    by Alberto Perez, Filip Lankas, Javier F Luque, Modesto Orozco
    posted to no-tag by sunhwan on 2008-04-17 18:38:52 as **
  • The influence of curvature on membrane domains
    European Biophysics Journal
    by Jeremy Pencer, Andrew Jackson, Norbert Kučerka, Mu-Ping Nieh, John Katsaras
    posted to no-tag by sunhwan on 2008-03-29 21:41:28 as ** along with 2 people and 1 group paulschlesinger sobolevnrm baker-group
  • Biomolecular simulations of membranes: Physical properties from different force fields
    The Journal of Chemical Physics, Vol. 128, No. 12. (2008)
    by Shirley WI Siu, Robert Vácha, Pavel Jungwirth, Rainer A Böckmann
    posted to no-tag by sunhwan on 2008-03-28 03:16:04 as read along with 2 people and 1 group sobolevnrm paulschlesinger baker-group
  • A computational investigation of thermodynamics, structure, dynamics and solvation behavior in modified water models
    The Journal of Chemical Physics, Vol. 128, No. 12. (2008)
    by Swaroop Chatterjee, Pablo G Debenedetti, Frank H Stillinger, Ruth
    posted to no-tag by sunhwan on 2008-03-28 03:16:01 as ** along with 1 person dmobley
  • Untitled
    posted to no-tag by sunhwan on 2008-03-28 03:15:40 as ** along with 1 person and 1 group sobolevnrm baker-group
  • A new approach for efficient simulation of Coulomb interactions in ionic fluids
    The Journal of Chemical Physics, Vol. 128, No. 12. (2008)
    by Natalia A Denesyuk, John D Weeks
    posted to no-tag by sunhwan on 2008-03-28 03:14:56 as ** along with 1 person and 1 group sobolevnrm baker-group
  • Complex Riboswitches
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1795-1797.
    by Ronald R Breaker
    posted to no-tag by sunhwan on 2008-03-28 03:08:11 as ** along with 2 people biomcgary austin
  • Gene Regulation in the Third Dimension
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1793-1794.
    by Job Dekker
    posted to no-tag by sunhwan on 2008-03-28 03:07:54 as ** along with 10 people and 2 groups operon AbnerCYH ealloza biomcgary dlobo lambda Haze emptyhb inesdesantiago ArtemPankin GEB Khavkin's lab
  • Accurate prediction of protonation state as a prerequisite for reliable MM-PB(GB)SA binding free energy calculations of HIV-1 protease inhibitors
    Journal of Computational Chemistry, Vol. 29, No. 5. (2008), pp. 673-685.
    by Kitiyaporn Wittayanarakul, Supot Hannongbua, Michael Feig
    posted to no-tag by sunhwan on 2008-03-28 03:05:41 as ** along with 3 people and 1 group sobolevnrm dmobley boris_aguilar baker-group
  • Picosecond Pirouette
    Science, Vol. 319, No. 5871. (28 March 2008), 1729a.
    posted to no-tag by sunhwan on 2008-03-28 03:05:13 as **
  • MATERIALS SCIENCE: Multitasking in Tissues and Materials
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1767-1768.
    by Phillip B Messersmith
    posted to no-tag by sunhwan on 2008-03-28 03:04:45 as **
  • Self-Assembly of Large and Small Molecules into Hierarchically Ordered Sacs and Membranes
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1812-1816.
    by Ramille M Capito, Helena S Azevedo, Yuri S Velichko, Alvaro Mata, Samuel I Stupp
    posted to no-tag by sunhwan on 2008-03-28 02:57:09 as **
  • Magnetar-Like Emission from the Young Pulsar in Kes 75
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1802-1805.
    by FP Gavriil, ME Gonzalez, EV Gotthelf, VM Kaspi, MA Livingstone, PM Woods
    posted to no-tag by sunhwan on 2008-03-28 02:56:49 as **
  • Nutritional Control of Reproductive Status in Honeybees via DNA Methylation.
    Science (13 March 2008)
    by R Kucharski, J Maleszka, S Foret, R Maleszka
    posted to no-tag by sunhwan on 2008-03-28 02:56:25 as ** along with 9 people and 1 group stevanspringer aprasad kengg djkt epigenetics aubinhon faion kjglennie stefanjanusz Integrative_biology_behavior
  • Structure of the Immature Dengue Virus at Low pH Primes Proteolytic Maturation
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1834-1837.
    by I-Mei Yu, Wei Zhang, Heather A Holdaway, Long Li, Victor A Kostyuchenko, Paul R Chipman, Richard J Kuhn, Michael G Rossmann, Jue Chen
    posted to no-tag by sunhwan on 2008-03-28 02:55:56 as ** along with 1 person and 1 group wsjames Oxford Virology
  • Insect Odorant Receptors Are Molecular Targets of the Insect Repellent DEET
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1838-1842.
    by Mathias Ditzen, Maurizio Pellegrino, Leslie B Vosshall
    posted to no-tag by sunhwan on 2008-03-28 02:55:29 as **
  • Aversive Learning Enhances Perceptual and Cortical Discrimination of Indiscriminable Odor Cues
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1842-1845.
    by Wen Li, James D Howard, Todd B Parrish, Jay A Gottfried
    posted to no-tag by sunhwan on 2008-03-28 02:55:04 as ** along with 2 people and 1 group nelmor shivakmr VisionLab
  • Surface Trapping of Atoms and Molecules with Dipole Rings
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1824-1826.
    by Hugo Dil, Jorge Lobo-Checa, Robert Laskowski, Peter Blaha, Simon Berner, Jurg Osterwalder, Thomas Greber
    posted to no-tag by sunhwan on 2008-03-28 02:54:46 as **
  • Global histone acetylation induces functional genomic reorganization at mammalian nuclear pore complexes
    Genes Dev., Vol. 22, No. 5. (1 March 2008), pp. 627-639.
    by Christopher R Brown, Caleb J Kennedy, Valerie A Delmar, Douglass J Forbes, Pamela A Silver
    posted to no-tag by sunhwan on 2008-03-28 02:51:49 as ** along with 1 person kengg
  • Coarse-Graining in Interaction Space: A Systematic Approach for Replacing Long-Range Electrostatics with Short-Range Potentials
    J. Phys. Chem. B (27 March 2008)
    by S Izvekov, JMJ Swanson, GA Voth
    posted to no-tag by sunhwan on 2008-03-27 15:53:14 as ** along with 1 person and 1 group sobolevnrm baker-group
  • Electrostatic Free Energy Landscapes for DNA Helix Bending
    Biophys. J., Vol. 94, No. 8. (15 April 2008), pp. 3137-3149.
    by Zhi-Jie Tan, Shi-Jie Chen
    posted to no-tag by sunhwan on 2008-03-27 02:12:25 as ** along with 2 people and 1 group sobolevnrm Elena_Zubova baker-group
  • Rotation of Lipids in Membranes: MD Simulation, 31P Spin-Lattice Relaxation, and Rigid-Body Dynamics
    Biophys. J. (11 January 2008), biophysj.107.121806.
    by Jeffrey B Klauda, Mary F Roberts, Alfred G Redfield, Bernard R Brooks, Richard W Pastor
    posted to no-tag by sunhwan on 2008-03-26 20:03:19 as ** along with 2 people and 1 group sobolevnrm paulschlesinger baker-group
  • Do Chaperonins Boost Protein Yields by Accelerating Folding or Preventing Aggregation?
    Biophys. J., Vol. 94, No. 8. (15 April 2008), pp. 2987-2993.
    by AI Jewett, JE Shea
    posted to no-tag by sunhwan on 2008-03-26 20:03:09 as **
  • Biophysical Regulation of Lipid Biosynthesis in the Plasma Membrane
    Biophys. J. (11 January 2008), biophysj.107.118380.
    by Stephen H Alley, Oscar Ces, Richard H Templer, Mauricio Barahona
    posted to no-tag by sunhwan on 2008-03-26 20:02:27 as ** along with 1 person paulschlesinger
  • Does Arginine remain protonated in the lipid membrane? Insights from microscopic pKa calculations
    Biophys. J. (16 January 2008), biophysj.107.122945.
    by Jejoong Yoo, Qiang Cui
    posted to no-tag by sunhwan on 2008-03-26 20:01:44 as ** along with 2 people and 1 group sobolevnrm paulschlesinger baker-group
  • Tracing evolutionary pressure
    Bioinformatics, Vol. 24, No. 7. (1 April 2008), pp. 908-915.
    by Kai Ye, Gert Vriend, Adriaan P Ijzerman
    posted to no-tag by sunhwan on 2008-03-26 14:56:11 as ** along with 2 people and 2 groups barry gulkur structural_bioinformatics Bioinformatics
  • Acidic range titration of HEWL using a constant-pH molecular dynamics method
    Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2008), NA.
    by Miguel Machuqueiro, António M Baptista
    posted to no-tag by sunhwan on 2008-03-26 01:32:57 as ** along with 2 people and 1 group sobolevnrm skoddet baker-group
  • How to lose a kink and gain a helix: pH independent conformational changes of the fusion domains from influenza hemagglutinin in heterogeneous lipid bilayers
    Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2008), NA.
    by Hyunbum Jang, Naveen Michaud-Agrawal, Jennifer M Johnston, Thomas B Woolf
    posted to no-tag by sunhwan on 2008-03-26 01:32:41 as ** along with 1 person neils
  • From the Cover: Consistent blind protein structure generation from NMR chemical shift data
    Proceedings of the National Academy of Sciences, Vol. 105, No. 12. (25 March 2008), pp. 4685-4690.
    by Yang Shen, Oliver Lange, Frank Delaglio, Paolo Rossi, James M Aramini, Gaohua Liu, Alexander Eletsky, Yibing Wu, Kiran K Singarapu, Alexander Lemak, Alexandr Ignatchenko, Cheryl H Arrowsmith, Thomas Szyperski, Gaetano T Montelione, David Baker, Ad Bax
    posted to no-tag by sunhwan on 2008-03-26 01:32:28 as ** along with 5 people and 1 group zwang biehl skoddet apaydin dgront Nielsen group
  • Reassessing a sparse energetic network within a single protein domain
    Proceedings of the National Academy of Sciences (13 March 2008), 0711732105.
    by Celestine N Chi, Lisa Elfstrom, Yao Shi, Tord Snall, Ake Engstrom, Per Jemth
    posted to no-tag by sunhwan on 2008-03-26 01:30:20 as ** along with 4 people and 1 group apaydin cjeans cactus sobolevnrm baker-group
  • Tug-of-war as a cooperative mechanism for bidirectional cargo transport by molecular motors
    Proceedings of the National Academy of Sciences, Vol. 105, No. 12. (25 March 2008), pp. 4609-4614.
    by Melanie J Muller, Stefan Klumpp, Reinhard Lipowsky
    posted to no-tag by sunhwan on 2008-03-26 01:27:56 as ** along with 1 person lshaw
  • A Forced March across an RNA Folding Landscape
    Chemistry & Biology, Vol. 15, No. 3. (21 March 2008), pp. 211-213.
    by Scott K Silverman
    posted to no-tag by sunhwan on 2008-03-26 01:26:32 as **
  • Predicting RNA-binding sites from the protein structure based on electrostatics, evolution and geometry
    Nucl. Acids Res. (14 February 2008), gkn008.
    by Yao C Chen, Carmay Lim
    posted to no-tag by sunhwan on 2008-03-26 01:21:11 as ** along with 3 people and 1 group kaarsinogen sobolevnrm marck baker-group
  • Water: Water [mdash] an enduring mystery
    Nature, Vol. 452, No. 7185. (20 March 2008), pp. 291-292.
    by Philip Ball
    posted to no-tag by sunhwan on 2008-03-26 01:18:53 as ** along with 2 people dayjm middledomain
  • Global fitting without a global model: Regularization based on the continuity of the evolution of parameter distributions
    The Journal of Chemical Physics, Vol. 128, No. 11. (2008)
    by Jason T Giurleo, David S Talaga
    posted to no-tag by sunhwan on 2008-03-26 01:14:28 as **
  • Combining a polarizable force-field and a coarse-grained polarizable solvent model: Application to long dynamics simulations of bovine pancreatic trypsin inhibitor
    Journal of Computational Chemistry, Vol. 9999, No. 9999. (2008), NA.
    by Michel Masella, Daniel Borgis, Philippe Cuniasse
    posted to no-tag by sunhwan on 2008-03-26 01:13:51 as ** along with 1 person middledomain
  • Directionally negative friction: A method for enhanced sampling of rare event kinetics
    The Journal of Chemical Physics, Vol. 128, No. 11. (2008)
    by James Macfadyen, Jeff Wereszczynski, Ioan Andricioaei
    posted to no-tag by sunhwan on 2008-03-26 01:08:32 as **
  • Sensitivity of peptide conformational dynamics on clustering of a classical molecular dynamics trajectory
    The Journal of Chemical Physics, Vol. 128, No. 11. (2008)
    by Christian H Jensen, Dmitry Nerukh, Robert C Glen
    posted to no-tag by sunhwan on 2008-03-26 01:08:07 as **
  • What is principal component analysis?
    Nature Biotechnology, Vol. 26, No. 3., pp. 303-304.
    by Markus Ringnér
    posted to no-tag by sunhwan on 2008-03-26 01:06:19 as ** along with 54 people and 3 groups Yanno jyuh operon barry baaic dullhunk Bevan_Weir zeji gareth massivemayhem zwang GustavoLacerda GeeSharpMinor bmaust zambujo mingzhi starz1010101 maralena wchannels jennifermbui kdelavega zhouyu rsantana laharrin sobolevnrm fryanpan kengg rvosa dekay23 adacier hpaces waghsk rchauhan pavanghatty kristgy jfr bibay2004 xingxu quianominorleo abbie_riner craigwilson06 ashko markusd dayjm dimka i-stevenson chrissp100 tharris ale mjoach HugoMarcelo jdiezperezj rrbarb Nici baker-group FAB-lab Bioinformatics
  • How membrane proteins sense voltage
    Nat Rev Mol Cell Biol, Vol. 9, No. 4. (April 2008), pp. 323-332.
    by Francisco Bezanilla
    posted to no-tag by sunhwan on 2008-03-26 01:00:09 as ** along with 2 people and 1 group paulschlesinger sobolevnrm baker-group
  • Efficient free energy calculation of water across lipid membranes
    Journal of Computational Chemistry, Vol. 9999, No. 9999. (2008), NA.
    by Keiko Shinoda, Wataru Shinoda, Masuhiro Mikami
    posted to no-tag by sunhwan on 2008-03-26 00:53:46 as read
  • Introduction to OpenGL Programming Guide for Mac OS X
    posted to no-tag by sunhwan on 2008-03-18 19:56:56 as **
  • Loss of Egg Yolk Genes in Mammals and the Origin of Lactation and Placentation
    PLoS Biology, Vol. 6, No. 3. (1 March 2008), e63.
    by David Brawand, Walter Wahli, Henrik Kaessmann
    posted to no-tag by sunhwan on 2008-03-18 00:25:01 as read along with 1 person biomcgary
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