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stsafts library [440 articles]

Senaste artiklarna i stsafts bibliotek.
  • A statistical model for microarrays, optimal estimation algorithms, and limits of performance
    Signal Processing, IEEE Transactions on [see also Acoustics, Speech, and Signal Processing, IEEE Transactions on], Vol. 54, No. 6. (2006), pp. 2444-2455.
    by H Vikalo, B Hassibi, A Hassibi
    posted to microarrays estimation by stsaft on 2008-07-03 07:07:54 as **
  • The effect of base image window level selection on the dimensional measurement accuracy of resultant three-dimensional image displays
    Radiography, Vol. 9, No. 3. (August 2003), pp. 211-218.
    by AP Kurmis, TC Hearn, KJ Reynolds
    posted to windowing mri by stsaft on 2008-07-01 22:30:54 as **
  • Automatically choosing source color images for coloring grayscale images
    Computer Graphics and Image Processing, 2003. SIBGRAPI 2003. XVI Brazilian Symposium on (2003), pp. 151-158.
    by LFM Vieira, RD Vilela, ERD Nascimento, FA Fernandes, RL Carceroni, AA Araujo
    posted to color_transfer colorization by stsaft on 2008-07-01 21:08:19 as *****
  • Inpainting the colors
    Image Processing, 2005. ICIP 2005. IEEE International Conference on, Vol. 2 (2005), pp. II-698-701.
    by G Sapiro
    posted to colorization by stsaft on 2008-06-18 19:02:32 as **
  • notes Improvement on Colorization Accuracy by Partitioning Algorithm in CIELAB Color Space
    Advances in Multimedia Information Processing - PCM 2004 (2005), pp. 794-801.
    by Tomohisa Takahama, Takahiko Horiuchi, Hiroaki Kotera
    posted to colorization by stsaft on 2008-06-18 18:36:44 as **
  • Colorization algorithm for grayscale image by propagating seed pixels
    Image Processing, 2003. ICIP 2003. Proceedings. 2003 International Conference on, Vol. 1 (2003), pp. I-457-60 vol.1.
    by T Horiuchi, S Hirano
    posted to seed propagation colorization by stsaft on 2008-06-18 18:35:11 as ** along with 1 person atargowska
  • Genomic analysis.
    Current opinion in biotechnology, Vol. 11, No. 2. (April 2000), pp. 171-175.
    by PS Lee, KH Lee
    posted to review genomic analysis by stsaft on 2008-06-12 20:02:35 as **
  • A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies
    Nature Biotechnology, Vol. 24, No. 7. (02 July 2006), pp. 832-840.
    by Winston P Kuo, Fang Liu, Jeff Trimarchi, Claudio Punzo, Michael Lombardi, Jasjit Sarang, Mark E Whipple, Malini Maysuria, Kyle Serikawa, Sun Y Lee, Donald Mccrann, Jason Kang, Jeffrey R Shearstone, Jocelyn Burke, Daniel J Park, Xiaowei Wang, Trent L Rector, Paola Ricciardi-Castagnoli, Steven Perrin, Sangdun Choi, Roger Bumgarner, Ju H Kim, Glenn F Short, Mason W Freeman, Brian Seed, Roderick Jensen, George M Church, Eivind Hovig, Connie L Cepko, Peter Park, Lucila Ohno-Machado, Tor-Kristian Jenssen
    posted to validation platforms microarrays microarray comparison arrays by stsaft on 2008-06-12 19:07:49 as ** along with 2 people and 2 groups jfr dchughes G4ID Genetics-of-Gambling
  • The next generation of microarray research: applications in evolutionary and ecological genomics
    Heredity, Vol. aop, No. current.
    by SH Shiu, JO Borevitz,
    posted to snp sfp review r21 microarrays by stsaft on 2008-06-11 00:24:27 as **
  • The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata.
    Nucleic acids research, Vol. 36, No. Database issue. (January 2008)
    by K Liolios, K Mavromatis, N Tavernarakis, NC Kyrpides
    posted to r21 genomic databases by stsaft on 2008-06-09 21:50:22 as **
  • DNA multiplex hybridization on microarrays and thermodynamic stability in solution: a direct comparison.
    Nucleic acids research, Vol. 35, No. 21. (2007), pp. 7197-7208.
    by DJ Fish, MT Horne, GP Brewood, JP Goodarzi, S Alemayehu, A Bhandiwad, RP Searles, AS Benight
    posted to simulation multiplex microarray hybridization by stsaft on 2008-06-09 10:18:12 as **
  • Amplification and assembly of chip-eluted DNA (AACED): a method for high-throughput gene synthesis.
    Nucleic acids research, Vol. 32, No. 17. (2004), pp. 5011-5018.
    by KE Richmond, MH Li, MJ Rodesch, M Patel, AM Lowe, C Kim, LL Chu, N Venkataramaian, SF Flickinger, J Kaysen, PJ Belshaw, MR Sussman, F Cerrina
    posted to synthesis pcr microarrays by stsaft on 2008-06-09 10:09:42 as **
  • On-chip PCR amplification of very long templates using immobilized primers on glassy surfaces
    Biosensors and Bioelectronics, Vol. 20, No. 8. (15 February 2005), pp. 1491-1498.
    by Markus Nickisch-Rosenegk, Xenia Marschan, Dennie Andresen, Alexandra Abraham, Christian Heise, Frank F Bier
    posted to pcr microarrays by stsaft on 2008-06-09 10:06:34 as **
  • Microfluidic PicoArray synthesis of oligodeoxynucleotides and simultaneous assembling of multiple DNA sequences.
    Nucleic acids research, Vol. 32, No. 18. (2004), pp. 5409-5417.
    by X Zhou, S Cai, A Hong, Q You, P Yu, N Sheng, O Srivannavit, S Muranjan, JM Rouillard, Y Xia, X Zhang, Q Xiang, R Ganesh, Q Zhu, A Matejko, E Gulari, X Gao
    posted to synthetic synthesis biology by stsaft on 2008-06-09 09:37:28 as **
  • Reducing tile complexity for self-assembly through temperature programming
    (2006), pp. 571-580.
    by Ming-Yang Kao, Robert Schweller
    posted to self-assembly dna by stsaft on 2008-06-09 04:11:05 as **
  • Rapid evolution of a protein in vitro by DNA shuffling.
    Nature, Vol. 370, No. 6488. (4 August 1994), pp. 389-391.
    by WP Stemmer
    posted to shuffling by stsaft on 2008-06-09 03:58:28 as ** along with 1 person Ali3n
  • From The Cover: Triggered amplification by hybridization chain reaction
    PNAS, Vol. 101, No. 43. (26 October 2004), pp. 15275-15278.
    by Robert M Dirks, Niles A Pierce
    posted to self-assembly r21 hairpin displacement cascade by stsaft on 2008-06-08 22:15:08 as ** along with 2 people Hosna cthachuk
  • Molecular Beacons: Probes that Fluoresce upon Hybridization
    Nat Biotech, Vol. 14, No. 3. (March 1996), pp. 303-308.
    by Sanjay Tyagi, Fred R Kramer
    posted to molecular hairpin beacons by stsaft on 2008-06-07 22:26:20 as ** along with 1 person nahnah
  • Accurate multiplex gene synthesis from programmable DNA microchips
    Nature, Vol. 432, No. 7020. (23 December 2004), pp. 1050-1054.
    by Jingdong Tian, Hui Gong, Nijing Sheng, Xiaochuan Zhou, Erdogan Gulari, Xiaolian Gao, George Church
    posted to templated synthetic synthesis microarrays dna biology by stsaft on 2008-06-06 21:11:25 as ** along with 3 people rklancer opheliav mmt
  • Tests of rRNA hybridization to microarrays suggest that hybridization characteristics of oligonucleotide probes for species discrimination cannot be predicted
    Nucleic Acids Research, Vol. 34, No. 9. (2006), pp. e66-e66.
    by Pozhitkov, Alex, Noble, A Peter, Domazet-Loso, Tomislav, Nolte, W Arne, Sonnenberg, Rainer, Staehler, Peer, Beier, Markus, Tautz, Diethard
    posted to probe microarray kinetics hybridization errors by stsaft on 2008-06-06 19:15:18 as **
  • On-chip non-equilibrium dissociation curves and dissociation rate constants as methods to assess specificity of oligonucleotide probes
    Nucleic Acids Research, Vol. 34, No. 3. (2006), pp. e26-e26.
    by Lukas M Wick, Jean M Rouillard, Thomas S Whittam, Erdogan Gulari, James M Tiedje, Syed A Hashsham
    posted to thermodynamics probe microarray design corrections by stsaft on 2008-06-06 19:11:52 as **
  • Free energy of DNA duplex formation on short oligonucleotide microarrays
    Nucleic Acids Research, Vol. 35, No. 3. (February 2007), pp. e18-e18.
    by Zhang, Li, Wu, Chunlei, Carta, Roberto, Zhao, Haitao
    posted to thermodynamics probe microarray design by stsaft on 2008-06-06 19:06:20 as ** along with 1 person bertelsen
  • OligoWiz 2.0--integrating sequence feature annotation into the design of microarray probes.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005)
    by R Wernersson, HB Nielsen
    posted to probe microarray design by stsaft on 2008-06-06 18:58:14 as ** along with 2 people bertelsen GeeSharpMinor
  • Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy
    BMC Bioinformatics, Vol. 8 (19 September 2007), 350.
    by Guangan Hu, Manuel Llinas, Jingguang Li, Peter R Preiser, Zbynek Bozdech
    posted to probe microarrays design by stsaft on 2008-06-06 18:54:11 as **
  • Medical applications of microarray technologies: a regulatory science perspective.
    Nat Genet, Vol. 32 Suppl (December 2002), pp. 474-479.
    by EF Petricoin, JL Hackett, LJ Lesko, RK Puri, SI Gutman, K Chumakov, J Woodcock, DW Feigal, KC Zoon, FD Sistare
    posted to review r21 microarrays applications by stsaft on 2008-06-05 22:10:11 as ** along with 1 person jdiggans
  • Simulation of microarray data with realistic characteristics
    BMC Bioinformatics, Vol. 7 (18 July 2006), 349.
    by Matti Nykter, Tommi Aho, Miika Ahdesmaki, Pekka Ruusuvuori, Antti Lehmussola, Olli Yli-Harja
    posted to simulation microarray by stsaft on 2008-06-05 21:42:45 as ** along with 1 person jfr
  • Design and cloning strategies for constructing shRNA expression vectors.
    BMC biotechnology, Vol. 6 (2006)
    by GJ McIntyre, GC Fanning
    posted to shrna rnai rna interference by stsaft on 2008-06-05 20:10:23 as **
  • MOLECULAR BIOLOGY: Glimpses of a Tiny RNA World
    Science, Vol. 294, No. 5543. (26 October 2001), pp. 797-799.
    by Gary Ruvkun
    posted to sirna microrna by stsaft on 2008-06-05 20:02:04 as ** along with 1 person wulanw
  • FDA perspectives on potential microarray-based clinical diagnostics.
    Human genomics, Vol. 2, No. 4. (January 2006), pp. 236-243.
    by Z Tezak, D Ranamukhaarachchi, E Russek-Cohen, SI Gutman
    posted to microarray diagnostics by stsaft on 2008-06-05 01:10:04 as **
  • Quantification of mRNA using real-time RT-PCR.
    Nat Protoc, Vol. 1, No. 3. (2006), pp. 1559-1582.
    by T Nolan, RE Hands, SA Bustin
    posted to review quantitative qrt-pcr qpcr protocol pcr by stsaft on 2008-06-05 00:36:35 as ** along with 1 person jyuh
  • notes Correcting errors in synthetic DNA through consensus shuffling
    Nucleic Acids Research, Vol. 33, No. 6. (2005), pp. e55-e55.
    by Brock F Binkowski, Kathryn E Richmond, James Kaysen, Michael R Sussman, Peter J Belshaw
    posted to synthetic shuffling repair muth gene biology assembly by stsaft on 2008-06-04 18:08:38 as **
  • Another side of genomics: Synthetic biology as a means for the exploitation of whole-genome sequence information.
    J Biotechnol (21 January 2006)
    by Peer Stähler, Markus Beier, Xiaolian Gao, Jörg D D Hoheisel
    posted to synthetic gene biology assembly by stsaft on 2008-06-04 18:01:15 as ** along with 2 people and 1 group cgreal mmt CGREL
  • DNAWorks: an automated method for designing oligonucleotides for PCR-based gene synthesis.
    Nucleic Acids Res, Vol. 30, No. 10. (15 May 2002)
    by DM Hoover, J Lubkowski
    posted to temperature shuffling oligo melting gene evolution dna directed assembly by stsaft on 2008-06-04 17:54:04 as ** along with 1 person davidng
  • DNA MISMATCH REPAIR: Molecular Mechanisms and Biological Function
    Annual Review of Microbiology, Vol. 57, No. 1. (2003), pp. 579-608.
    by Mark J Schofield, Peggy Hsieh
    posted to repair mismatch dna by stsaft on 2008-06-03 22:43:31 as **
  • OligoDesign: optimal design of LNA (locked nucleic acid) oligonucleotide capture probes for gene expression profiling
    Nucl. Acids Res., Vol. 31, No. 13. (1 July 2003), pp. 3758-3762.
    by Niels Tolstrup, Peter S Nielsen, Jens G Kolberg, Annett M Frankel, Henrik Vissing, Sakari Kauppinen
    posted to oligo lna design by stsaft on 2008-06-03 00:54:42 as **
  • notes ChipCheck-A Program Predicting Total Hybridization Equilibria for DNA Binding to Small Oligonucleotide Microarrays
    J. Chem. Inf. Comput. Sci., Vol. 43, No. 6. (24 November 2003), pp. 2153-2162.
    by KH Siegmund, UE Steiner, C Richert
    posted to software simulations microarray hybridization by stsaft on 2008-06-03 00:43:15 as **
  • Fundamentals of experimental design for cDNA microarrays.
    Nature genetics, Vol. 32 Suppl (December 2002), pp. 490-495.
    by GA Churchill
    posted to validation review reference microarray by stsaft on 2008-06-02 23:20:48 as **
  • Post-analysis follow-up and validation of microarray experiments.
    Nat Genet, Vol. 32 Suppl (December 2002), pp. 509-514.
    by RF Chuaqui, RF Bonner, CJ Best, JW Gillespie, MJ Flaig, SM Hewitt, JL Phillips, DB Krizman, MA Tangrea, M Ahram, WM Linehan, V Knezevic, MR Emmert-Buck
    posted to validation review reference microarrays errors by stsaft on 2008-06-02 23:09:02 as ** along with 2 people and 1 group irenas ziquje dbk-lab
  • Color device calibration: a mathematical formulation
    Image Processing, IEEE Transactions on, Vol. 8, No. 12. (1999), pp. 1796-1806.
    by MJ Vrhel, HJ Trussell
    posted to reproduction device color calibration by stsaft on 2008-06-02 21:27:38 as **
  • Modeling DNA shuffling.
    Journal of computational biology : a journal of computational molecular cell biology, Vol. 6, No. 1. (1999), pp. 77-90.
    by F Sun
    posted to vitro thermodynamics shuffling mutagenesis model in evolution by stsaft on 2008-05-23 06:10:04 as **
  • Degenerate oligonucleotide gene shuffling.
    Methods in molecular biology (Clifton, N.J.), Vol. 352 (2007), pp. 191-204.
    by PL Bergquist, MD Gibbs
    posted to shuffling primers by stsaft on 2008-05-23 06:07:54 as **
  • Revealing biases inherent in recombination protocols
    BMC Biotechnology, Vol. 7 (14 November 2007), 77.
    by Javier F Chaparro-Riggers, Bernard LW Loo, Karen M Polizzi, Phillip R Gibbs, Xiao-Song Tang, Mark J Nelson, Andreas S Bommarius
    posted to shuffling crossover by stsaft on 2008-05-23 06:07:14 as **
  • eCodonOpt: a systematic computational framework for optimizing codon usage in directed evolution experiments.
    Nucleic acids research, Vol. 30, No. 11. (1 June 2002), pp. 2407-2416.
    by GL Moore, CD Maranas
    posted to thermodynamics shuffling kinetics crossover by stsaft on 2008-05-23 06:06:30 as **
  • Computational and experimental analysis of DNA shuffling.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 6. (18 March 2003), pp. 3071-3076.
    by N Maheshri, DV Schaffer
    posted to thermodynamics shuffling kinetics crossover by stsaft on 2008-05-23 06:05:40 as **
  • Predicting crossover generation in DNA shuffling.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 6. (13 March 2001), pp. 3226-3231.
    by GL Moore, CD Maranas, S Lutz, SJ Benkovic
    posted to thermodynamics shuffling crossover by stsaft on 2008-05-23 06:05:04 as **
  • Stochastic active contour for cardiac MR image segmentation
    Image Processing, 2003. ICIP 2003. Proceedings. 2003 International Conference on, Vol. 2 (2003), pp. II-1097-100 vol.3.
    by C Pluempitiwiriyawej, JMF Moura, YJL Wu, S Kanno, C Ho
    posted to segmentation mri contour ac by stsaft on 2008-05-21 17:32:29 as **
  • Example Based Non-rigid Shape Detection
    Computer Vision – ECCV 2006 (2006), pp. 423-436.
    by Yefeng Zheng, Xiang Zhou, Bogdan Georgescu, Shaohua Zhou, Dorin Comaniciu
    posted to shape segmentation mri detection by stsaft on 2008-05-21 17:31:44 as **
  • Object Trajectory-Based Activity Classification and Recognition Using Hidden Markov Models
    Image Processing, IEEE Transactions on, Vol. 16, No. 7. (2007), pp. 1912-1919.
    by FI Bashir, AA Khokhar, D Schonfeld
    posted to trajectory hmm detection classification ccitt by stsaft on 2008-05-15 00:50:52 as ** along with 1 person jford
  • Robust event detection by radial reach filter (RRF)
    Pattern Recognition, 2002. Proceedings. 16th International Conference on, Vol. 2 (2002), pp. 623-626 vol.2.
    by Y Satoh, H Tanahashi, Caihua Wang, S Kaneko, Y Niwa, K Yamamoto
    posted to filtering detection ccitt by stsaft on 2008-05-15 00:50:19 as **
  • A General Two-Dimensional Hidden Markov Model and its Application in Image Classification
    Image Processing, 2007. ICIP 2007. IEEE International Conference on, Vol. 6 (2007), pp. VI - 41-VI - 44.
    by Xiang Ma, D Schonfeld, A Khokhar
    posted to segmentation hmm classification ccitt by stsaft on 2008-05-15 00:47:55 as **
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