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neils' sequence [54 articles]

Senaste hänvisningarna i neils' bibliotek insorterade under taggen sequence. You can also see everyone's sequence.
  • Genome signature analysis of thermal virus metagenomes reveals Archaea and thermophilic signatures
    BMC Genomics, Vol. 9 (17 September 2008), 420.
    by David T Pride, Thomas Schoenfeld
    posted to virus thermophily sequence metagenomics archaea analysis by neils on 2008-09-18 13:51:45 as **
  • Identification and correction of abnormal, incomplete and mispredicted proteins in public databases
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Alinda Nagy, Hedi Hegyi, Krisztina Farkas, Hedvig Tordai, Evelin Kozma, Laszlo Banyai, Laszlo Patthy
    posted to bioinformatics database errors prediction protein sequence structure by neils on 2008-08-28 00:42:01 as ** along with 2 people grahamc piergiorgioduca
  • Extracting sequence features to predict protein-DNA interactions: a comparative study
    Nucl. Acids Res., Vol. 36, No. 12. (1 July 2008), pp. 4137-4148.
    by Qing Zhou, Jun S Liu
    posted to bioinformatics interaction prediction protein-dna sequence by neils on 2008-07-11 00:31:23 as ** along with 1 person maximilianh
  • PROMALS3D web server for accurate multiple protein sequence and structure alignments
    Nucl. Acids Res. (24 May 2008), gkn322.
    by Jimin Pei, Ming Tang, Nick V Grishin
    posted to alignment bioinformatics protein sequence structure webserver by neils on 2008-05-29 04:29:21 as **
  • Prediction of enzyme function by combining sequence similarity and protein interactions
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Jordi Espadaler, Narayanan Eswar, Enric Querol, Francesc Aviles, Andrej Sali, Marc M Renom, Baldomero Oliva
    posted to bioinformatics enzyme function interaction prediction protein-protein sequence by neils on 2008-05-28 01:05:07 as ** along with 1 person and 1 group aprildh31 Proteasome
  • Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia
    Genome Res. (May 2008)
    by Claire Amadou, Geraldine Pascal, Sophie Mangenot, Michelle Glew, Cyril Bontemps, Delphine Capela, Sebastien Carrere, Stephane Cruveiller, Carole Dossat, Aurelie Lajus, Marta Marchetti, Verena Poinsot, Zoe Rouy, Bertrand Servin, Maged Saad, Chantal Schenowitz, Valerie Barbe, Jacques Batut, Claudine Medigue, Catherine M Boivin
    posted to cupriavidus genome genomics rhizobia sequence by neils on 2008-05-20 03:53:46 as **
  • The cytochromes c-550 of Paracoccus denitrificans and Thiosphaera pantotropha: a need for re-evaluation of the history of Paracoccus cultures
    FEMS Microbiology Letters, Vol. 137, No. 1. (1996), pp. 95-101.
    by Celia F Goodhew, Graham W Pettigrew, Bart Devreese, Jozef Beeumen, Rob J Spanning, Simon C Baker, Neil Saunders, Stuart J Ferguson, Ian P Thompson
    posted to analysis cytochrome paracoccus sequence by neils on 2008-05-11 10:37:08 as **
  • Serpins in unicellular Eukarya, Archaea, and Bacteria: sequence analysis and evolution.
    Journal of molecular evolution, Vol. 59, No. 4. (October 2004), pp. 437-447.
    by TH Roberts, J Hejgaard, NF Saunders, R Cavicchioli, PM Curmi
    posted to analysis bioinformatics evolution sequence serpin by neils on 2008-05-11 10:11:58 as **
  • Discovering sequence motifs with arbitrary insertions and deletions.
    PLoS computational biology, Vol. 4, No. 4. (April 2008)
    by MC Frith, NF Saunders, B Kobe, TL Bailey
    posted to bioinformatics discovery glam2 motifs sequence by neils on 2008-05-09 13:29:46 as ** along with 6 people gjuggler Stew dquest cabbagesofdoom Ema Evangelia
  • Vertebrate Genomes Code Excess Proteins with Charge Periodicity of 28 Residues
    J Biochem, Vol. 143, No. 5. (1 May 2008), pp. 661-665.
    by Runcong Ke, Noriyuki Sakiyama, Ryusuke Sawada, Masashi Sonoyama, Shigeki Mitaku
    posted to charge genomics nuclear periodicity protein vertebrate sequence by neils on 2008-05-06 14:13:37 as **
  • Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Steven Salzberg, Daniel Sommer, Michael Schatz, Adam Phillippy, Pablo Rabinowicz, Seiji Tsuge, Ayako Furutani, Hirokazu Ochiai, Arthur Delcher, David Kelley, Ramana Madupu, Daniela Puiu, Diana Radune, Martin Shumway, Cole Trapnell, Gudlur Aparna, Gopaljee Jha, Alok Pandey, Prabhu Patil, Hiromichi Ishihara, Damien Meyer, Boris Szurek, Valerie Verdier, Ralf Koebnik, Maxwell J Dow, Robert Ryan, Hisae Hirata, Shinji Tsuyumu, Sang W Lee, Pamela Ronald, Ramesh Sonti, Marie A Van Sluys, Jan Leach, Frank White, Adam Bogdanove
    posted to evolution genome pathogen rice sequence xanthomonas by neils on 2008-05-02 00:28:46 as **
  • SCPRED: Accurate prediction of protein structural class for sequences of twilight-zone similarity with predicting sequences
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Lukasz Kurgan, Krzysztof Cios, Ke Chen
    posted to bioinformatics prediction protein sequence structure by neils on 2008-05-02 00:27:57 as **
  • Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs.
    Nucleic Acids Res, Vol. 31, No. 13. (1 July 2003), pp. 3635-3641.
    by JC Obenauer, LC Cantley, MB Yaffe
    posted to analysis article-nar article-predikin binding internet motifs phosphorylation protein proteome sequence signal sites software structure transduction amino-acid database algorithm by neils on 2008-04-24 16:16:06 as ** along with 2 people mloewer Evangelia
  • The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
    Nature, Vol. 452, No. 7190. (24 April 2008), pp. 991-996.
    by Ray Ming, Shaobin Hou, Yun Feng, Qingyi Yu, Alexandre Dionne-Laporte, Jimmy H Saw, Pavel Senin, Wei Wang, Benjamin V Ly, Kanako L Lewis, Steven L Salzberg, Lu Feng, Meghan R Jones, Rachel L Skelton, Jan E Murray, Cuixia Chen, Wubin Qian, Junguo Shen, Peng Du, Moriah Eustice, Eric Tong, Haibao Tang, Eric Lyons, Robert E Paull, Todd P Michael, Kerr Wall, Danny W Rice, Henrik Albert, Ming-Li Wang, Yun J Zhu, Michael Schatz, Niranjan Nagarajan, Ricelle A Acob, Peizhu Guan, Andrea Blas, Ching M Wai, Christine M Ackerman, Yan Ren, Chao Liu, Jianmei Wang, Jianping Wang, Jong-Kuk Na, Eugene V Shakirov, Brian Haas, Jyothi Thimmapuram, David Nelson, Xiyin Wang, John E Bowers, Andrea R Gschwend, Arthur L Delcher, Ratnesh Singh, Jon Y Suzuki, Savarni Tripathi, Kabi Neupane, Hairong Wei, Beth Irikura, Maya Paidi, Ning Jiang, Wenli Zhang, Gernot Presting, Aaron Windsor, Rafael Navajas-Perez, Manuel J Torres, Alex F Feltus, Brad Porter, Yingjun Li, Max A Burroughs, Ming-Cheng Luo, Lei Liu, David A Christopher, Stephen M Mount, Paul H Moore, Tak Sugimura, Jiming Jiang, Mary A Schuler, Vikki Friedman, Thomas Mitchell-Olds, Dorothy E Shippen, Claude W Depamphilis, Jeffrey D Palmer, Michael Freeling, Andrew H Paterson, Dennis Gonsalves, Lei Wang, Maqsudul Alam
    posted to genome genomics papaya plant sequence by neils on 2008-04-24 00:39:40 as ** along with 3 people cmzmasek tanghaibao bpcusack
  • ROC analysis: applications to the classification of biological sequences and 3D structures
    Brief Bioinform (11 January 2008), bbm064.
    by Paolo Sonego, Andras Kocsor, Sandor Pongor
    posted to classification roc sequence statistics structure by neils on 2008-04-23 13:46:17 as ** along with 4 people cjeans girschick nklee spsdigest
  • Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis
    Genome Res. (2008)
    by Timothy P Stinear, Torsten Seemann, Paul F Harrison, Grant A Jenkin, John K Davies, Paul, Zahra Abdellah, Claire Arrowsmith, Tracey Chillingworth, Carol Churcher, Kay Clarke, Ann Cronin, Paul Davis, Ian Goodhead, Nancy Holroyd, Kay Jagels, Angela Lord, Sharon Moule, Karen Mungall, Halina Norbertczak, Michael A Quail, Ester Rabbinowitsch, Danielle Walker, Brian White, Sally Whitehead, Pamela, Roland Brosch, Lalita Ramakrishnan, Michael A Fischbach, Julian Parkhill, Stewart T Cole
    posted to genome marine mycobacterium pathogen sequence by neils on 2008-04-11 03:56:37 as **
  • Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Shibu Yooseph, Weizhong Li, Granger Sutton
    posted to bioinformatics classification clustering genomics metagenomics microbial sequence by neils on 2008-04-11 01:50:41 as ** along with 1 person alexl
  • Simple is beautiful: a straightforward approach to improve the delineation of true and false positives in PSI-BLAST searches
    Bioinformatics (2008)
    by Marianne M Lee, Michael K Chan, Ralf Bundschuh
    posted to analysis bioinformatics psi-blast sequence statistics by neils on 2008-04-11 01:32:11 as **
  • Evolutionary Patterns in the Sequence and Structure of Transfer RNA: Early Origins of Archaea and Viruses
    PLoS Comput Biol, Vol. 4, No. 3. (Mar 2008)
    by Feng J Sun, Gustavo C Anollés
    posted to archaea bioinformatics evolution phylogeny sequence structure trna virus by neils on 2008-03-12 02:45:33 as **
  • The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis
    Nature, Vol. 452, No. 7183. (6 March 2008), pp. 88-92.
    by F Martin, A Aerts, D Ahren, A Brun, EGJ Danchin, F Duchaussoy, J Gibon, A Kohler, E Lindquist, V Pereda, A Salamov, HJ Shapiro, J Wuyts, D Blaudez, M Buee, P Brokstein, B Canback, D Cohen, PE Courty, PM Coutinho, C Delaruelle, JC Detter, A Deveau, S Difazio, S Duplessis, L Fraissinet-Tachet, E Lucic, P Frey-Klett, C Fourrey, I Feussner, G Gay, J Grimwood, PJ Hoegger, P Jain, S Kilaru, J Labbe, YC Lin, V Legue, F Le Tacon, R Marmeisse, D Melayah, B Montanini, M Muratet, U Nehls, H Niculita-Hirzel, Oudot-Le MP Secq, M Peter, H Quesneville, B Rajashekar, M Reich, N Rouhier, J Schmutz, T Yin, M Chalot, B Henrissat, U Kues, S Lucas, Y Van de Peer, GK Podila, A Polle, PJ Pukkila, PM Richardson, P Rouze, IR Sanders, JE Stajich, A Tunlid, G Tuskan, IV Grigoriev
    posted to bioinformatics genome laccaria mycorrhizae sequence symbiosis by neils on 2008-03-05 22:43:14 as ** along with 6 people alexl biomcgary cmzmasek urgi jamselem manzanita
  • The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.
    Proc Natl Acad Sci U S A, Vol. 102, No. 31. (2 August 2005), pp. 10913-10918.
    by BA Methé, KE Nelson, JW Deming, B Momen, E Melamud, X Zhang, J Moult, R Madupu, WC Nelson, RJ Dodson, LM Brinkac, SC Daugherty, AS Durkin, RT DeBoy, JF Kolonay, SA Sullivan, L Zhou, TM Davidsen, M Wu, AL Huston, M Lewis, B Weaver, JF Weidman, H Khouri, TR Utterback, TV Feldblyum, CM Fraser
    posted to colwellia for-thuber genome genomics psychrophily sequence by neils on 2008-01-25 06:53:04 as ** along with 4 people bpb gilda MeganBarnett min013
  • Amino acid composition of genomes, lifestyles of organisms, and evolutionary trends: a global picture with correspondence analysis
    Gene, Vol. 297, No. 1-2. (4 September 2002), pp. 51-60.
    by Fredj Tekaia, Edouard Yeramian, Bernard Dujon
    posted to analysis composition correspondence evolution for-thuber genomics global thermophily sequence protein by neils on 2008-01-25 06:51:06 as ** along with 1 person nagendranow
  • Statistical analysis of the physical properties of the 20 naturally occurring amino acids
    Journal of Protein Chemistry, Vol. 4, No. 1. (1 February 1985), pp. 23-55.
    by Akinori Kidera, Yasuo Konishi, Masahito Oka, Tatsuo Ooi, Harold A Scheraga
    posted to statistics amino-acid sequence protein by neils on 2007-12-11 06:54:52 as **
  • Protein kinase specificity. A strategic collaboration between kinase peptide specificity and substrate recruitment.
    Cell Cycle, Vol. 4, No. 1. (Jan 2005), pp. 52-56.
    by Guozhi Zhu, Yin Liu, Stephen Shaw
    posted to activation article-predikin enzyme fragments interaction mapping peptide phosphorylation protein sequence signal specificity substrate transduction amino-acid kinase human by neils on 2007-12-04 03:22:14 as **
  • GPS: a comprehensive www server for phosphorylation sites prediction.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (Jul 2005), pp. W184-W187.
    by Yu Xue, Fengfeng Zhou, Minjie Zhu, Kashif Ahmed, Guoliang Chen, Xuebiao Yao
    posted to analysis article-nar article-predikin internet microfilament phosphorylation protein sequence software specificity substrate tissue kinase phosphoprotein by neils on 2007-12-04 03:22:14 as **
  • PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory.
    BMC Bioinformatics, Vol. 7 (2006)
    by Yu Xue, Ao Li, Lirong Wang, Huanqing Feng, Xuebiao Yao
    posted to alignment analysis article-nar article-predikin bayes binding data molecular phosphorylation protein sequence sites software theorem amino-acid kinase by neils on 2007-12-04 03:22:14 as **
  • Centrosomal anchoring of the protein kinase CK1delta mediated by attachment to the large, coiled-coil scaffolding protein CG-NAP/AKAP450.
    J Mol Biol, Vol. 322, No. 4. (Sep 2002), pp. 785-797.
    by James E Sillibourne, Diane M Milne, Mikiko Takahashi, Yoshitaka Ono, David W Meek
    posted to adaptor aethiops anchor article-predikin carrier casein catalysis centrosome cercopithecus cos cytoskeletal data fractions fragments fusion isoenzymes kinase male molecular peptide precipitin protein recombinant sequence signal specificity structure subcellular substrate tertiary tests transducing amino-acid rat cell animal human by neils on 2007-12-04 03:22:14 as **
  • Phosphorylation of p90 ribosomal S6 kinase (RSK) regulates extracellular signal-regulated kinase docking and RSK activity.
    Mol Cell Biol, Vol. 23, No. 14. (Jul 2003), pp. 4796-4804.
    by Philippe P Roux, Stephanie A Richards, John Blenis
    posted to 90-kda article-predikin binding cultured data epidermal extracellular growth homology isoenzymes kinase matrix mitogen-activated mitogens molecular mutation phosphorylation protein ribosomal s6 sequence serine signal sites structure tertiary transduction factors amino-acid cell human by neils on 2007-12-04 03:22:14 as **
  • A dimeric kinase assembly underlying autophosphorylation in the p21 activated kinases.
    J Mol Biol, Vol. 361, No. 2. (Aug 2006), pp. 312-326.
    by Michelle Pirruccello, Holger Sondermann, Jeffrey G Pelton, Patricia Pellicena, André Hoelz, Jonathan Chernoff, David E Wemmer, John Kuriyan
    posted to activation article-predikin binding catalysis catalytic conformation crystallography data dimerization domain enzyme folding homology kinetics models molecular mutation p21-activated phosphopeptides phosphorylation protein protein-serine-threonine sequence sites structure tertiary x-ray amino-acid kinase human by neils on 2007-12-04 03:22:14 as **
  • How do protein kinases recognize their substrates?
    Biochim Biophys Acta, Vol. 1314, No. 3. (Dec 1996), pp. 191-225.
    by LA Pinna, M Ruzzene
    posted to article-predikin consensus data library molecular peptide phosphorylation protein sequence specificity substrate amino-acid kinase animal by neils on 2007-12-04 03:22:14 as **
  • Identification of residues which regulate activity of the STE20-related kinase hMINK.
    Biochem Biophys Res Commun, Vol. 300, No. 3. (Jan 2003), pp. 694-698.
    by Jaeseung Lim, Andrew Lennard, Paul W Sheppard, Stuart Kellie
    posted to antibody article-predikin cell cerevisiae cloning data jnk kidney line mitogen-activated molecular mutagenesis organ phosphorylation potassium protein protein-serine-threonine relationship saccharomyces sequence site-directed specificity structure structure-activity tertiary voltage-gated amino-acid kinase channel human by neils on 2007-12-04 03:22:13 as **
  • SMART 5: domains in the context of genomes and networks.
    Nucleic Acids Res, Vol. 34, No. Database issue. (Jan 2006), pp. D257-D260.
    by Ivica Letunic, Richard R Copley, Birgit Pils, Stefan Pinkert, Jörg Schultz, Peer Bork
    posted to alignment analysis article-nar article-pka-pkg article-predikin biological catalysis catalytic domain genomics interface internet models multiprotein protein sequence structure tertiary user-computer database complex by neils on 2007-12-04 03:22:13 as **
  • The active conformation of the PAK1 kinase domain.
    Structure, Vol. 13, No. 5. (May 2005), pp. 769-778.
    by Ming Lei, Michael A Robinson, Stephen C Harrison
    posted to adenosine article-predikin binding data diffraction molecular mutation protein protein-serine-threonine sequence sites structure tertiary triphosphate x-ray kinase human by neils on 2007-12-04 03:22:13 as **
  • Structural modes of stabilization of permissive phosphorylation sites in protein kinases: distinct strategies in Ser/Thr and Tyr kinases.
    J Mol Biol, Vol. 339, No. 5. (Jun 2004), pp. 1025-1039.
    by A Krupa, G Preethi, N Srinivasan
    posted to activation adenosine alignment article-predikin catalytic data domain enzyme models molecular phosphorylation protein protein-serine-threonine protein-tyrosine sequence signal structure tertiary transduction triphosphate amino-acid kinase by neils on 2007-12-04 03:22:13 as **
  • Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors.
    Plant J, Vol. 44, No. 6. (Dec 2005), pp. 939-949.
    by Yuhko Kobayashi, Michiharu Murata, Hideyuki Minami, Shuhei Yamamoto, Yasuaki Kagaya, Tokunori Hobo, Akiko Yamamoto, Tsukaho Hattori
    posted to abscisic activation article-predikin basic-leucine data elements enzyme expression factors gene growth kinetics molecular oryza osmotic phosphorylation plant pressure protein-serine-threonine recombinant regulation response sativa sequence serine signal transcription transduction zipper amino-acid kinase protein regulator by neils on 2007-12-04 03:22:13 as **
  • Prediction of phosphorylation sites using SVMs.
    Bioinformatics, Vol. 20, No. 17. (Nov 2004), pp. 3179-3184.
    by Jong H Kim, Juyoung Lee, Bermseok Oh, Kuchan Kimm, Insong Koh
    posted to alignment analysis article-predikin artificial binding chemical computer intelligence models molecular phosphorylation protein relationship sequence simulation sites structure-activity algorithm phosphotransferase by neils on 2007-12-04 03:22:13 as **
  • Biochemical characterization of the tobacco 42-kD protein kinase activated by osmotic stress.
    Plant Physiol, Vol. 136, No. 2. (Oct 2004), pp. 3255-3265.
    by Anna Kelner, Izabela Pekala, Szymon Kaczanowski, Grazyna Muszynska, Grahame D Hardie, Grazyna Dobrowolska
    posted to activation adenosine article-predikin calcium chlorides data enzyme evolution homology kinase magnesium manganese molecular monophosphate osmotic phylogeny pressure protein sequence specificity substrate tobacco water amino-acid inhibitor by neils on 2007-12-04 03:22:13 as **
  • C-terminal repeat domain kinase I phosphorylates Ser2 and Ser5 of RNA polymerase II C-terminal domain repeats.
    J Biol Chem, Vol. 279, No. 24. (Jun 2004), pp. 24957-24964.
    by Janice C Jones, Hemali P Phatnani, Timothy A Haystead, Justin A Macdonald, Munir S Alam, Arno L Greenleaf
    posted to article-predikin data molecular monoclonal phosphorylation polymerase protein repetitive rna saccharomycetales sequence serine specificity substrate amino-acid kinase antibody by neils on 2007-12-04 03:22:13 as **
  • KinasePhos: a web tool for identifying protein kinase-specific phosphorylation sites.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (Jul 2005), pp. W226-W229.
    by Hsien Da Huang, Tzong Y Lee, Shih W Tzeng, Jorng T Horng
    posted to analysis article-nar article-predikin biology computational internet markov phosphorylation protein sequence software chain kinase phosphoprotein by neils on 2007-12-04 03:22:12 as **
  • Amino acid substitution matrices from protein blocks.
    Proc Natl Acad Sci U S A, Vol. 89, No. 22. (Nov 1992), pp. 10915-10919.
    by S Henikoff, JG Henikoff
    posted to article-predikin caenorhabditis data drosophila elegans homology lod mathematics molecular probability score sequence software amino-acid algorithm protein animal by neils on 2007-12-04 03:22:12 as **
  • BRSK2 is activated by cyclic AMP-dependent protein kinase A through phosphorylation at Thr260.
    Biochem Biophys Res Commun, Vol. 347, No. 4. (Sep 2006), pp. 867-871.
    by Zekun Guo, Wenwen Tang, Jian Yuan, Xinya Chen, Bo Wan, Xiuting Gu, Kuntian Luo, Yingli Wang, Long Yu
    posted to activation alignment amp-dependent article-predikin cyclic data enzyme molecular phosphorylation protein protein-serine-threonine sequence threonine amino-acid kinase by neils on 2007-12-04 03:22:12 as **
  • Characterization of cyclin L2, a novel cyclin with an arginine/serine-rich domain: phosphorylation by DYRK1A and colocalization with splicing factors.
    J Biol Chem, Vol. 279, No. 6. (Feb 2004), pp. 4612-4624.
    by Katrin de Graaf, Paul Hekerman, Oliver Spelten, Andreas Herrmann, Len C Packman, Konrad Büssow, Gerhard M Newen, Walter Becker
    posted to arginine article-predikin base cell complementary cos data dna factors fusion male mice molecular nucleus phosphorylation protein protein-serine-threonine protein-tyrosine recombinant rna sequence serine specificity splicing structure substrate tertiary transcription amino-acid rat kinase animal human cyclin by neils on 2007-12-04 03:22:12 as **
  • Pfam: clans, web tools and services.
    Nucleic Acids Res, Vol. 34, No. Database issue. (Jan 2006), pp. D247-D251.
    by Robert D Finn, Jaina Mistry, Benjamin S Böckler, Sam G Jones, Volker Hollich, Timo Lassmann, Simon Moxon, Mhairi Marshall, Ajay Khanna, Richard Durbin, Sean R Eddy, Erik LL Sonnhammer, Alex Bateman
    posted to alignment article-predikin computer graphics interface internet markov protein sequence software structure tertiary user-computer chain database by neils on 2007-12-04 03:22:12 as **
  • Profile hidden Markov models.
    Bioinformatics, Vol. 14, No. 9. (1998), pp. 755-763.
    by SR Eddy
    posted to alignment article-nar article-predikin hmm library markov peptide sequence software chain by neils on 2007-12-04 03:22:12 as **
  • ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (Jul 2006), pp. W362-W365.
    by Edouard de Castro, Christian JA Sigrist, Alexandre Gattiker, Virginie Bulliard, Petra, Elisabeth Gasteiger, Amos Bairoch, Nicolas Hulo
    posted to analysis article-predikin homology interface internet protein sequence software structure tertiary user-computer amino-acid database by neils on 2007-12-04 03:22:12 as **
  • A kinase sequence database: sequence alignments and family assignment.
    Bioinformatics, Vol. 18, No. 9. (Sep 2002), pp. 1274-1275.
    by Oleksandr Buzko, Kevan M Shokat
    posted to alignment analysis article-predikin cluster database homology information internet management protein retrieval sequence storage kinase system by neils on 2007-12-04 03:22:12 as **
  • Protein kinases associated with the yeast phosphoproteome.
    BMC Bioinformatics, Vol. 7 (2006)
    by Ross I Brinkworth, Alan L Munn, Bostjan Kobe
    posted to alignment analysis article-predikin cerevisiae data interaction mapping molecular phosphorylation protein proteome saccharomyces sequence specificity substrate amino-acid fungi kinase phosphoprotein by neils on 2007-12-04 03:22:12 as **
  • Sequence and structure-based prediction of eukaryotic protein phosphorylation sites.
    J Mol Biol, Vol. 294, No. 5. (Dec 1999), pp. 1351-1362.
    by N Blom, S Gammeltoft, S Brunak
    posted to article-nar article-predikin binding computer consensus eukaryotic glycosylation models molecular motifs