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jyuhs interactome [73 articles]

Senaste hänvisningarna i jyuhs bibliotek insorterade under taggen interactome. You can also see everyone's interactome.
  • High-Quality Binary Protein Interaction Map of the Yeast Interactome Network
    Science (21 August 2008), 1158684.
    by Haiyuan Yu, Pascal Braun, Muhammed A Yildirim, Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amelie Dricot, Alexei Vazquez, Ryan R Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E Hudson, Juyong Park, Xiaofeng Xin, Michael E Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P Roth, Albert-Laszlo Barabasi, Jan Tavernier, David E Hill, Marc Vidal
    posted to yeast interactome by jyuh on 2008-09-02 11:30:11 as ** along with 4 people grahamc yeastyboy maralena neils
  • Mapping multiprotein complexes by affinity purification and mass spectrometry.
    Current opinion in biotechnology (30 June 2008)
    by Mark O O Collins, Jyoti S S Choudhary
    posted to tap ms interactome by jyuh on 2008-09-02 11:29:57 as ** along with 1 person nuin
  • High confidence determination of specific protein-protein interactions using quantitative mass spectrometry.
    Current opinion in biotechnology (27 June 2008)
    by Michiel Vermeulen, Nina C C Hubner, Matthias Mann
    posted to interactome ms by jyuh on 2008-08-22 17:28:07 as ** along with 1 person brianb
  • SH3-Hunter: discovery of SH3 domain interaction sites in proteins.
    Nucleic acids research, Vol. 35, No. Web Server issue. (July 2007)
    by E Ferraro, D Peluso, A Via, G Ausiello, M Helmer-Citterich
    posted to interactome by jyuh on 2008-08-19 04:52:49 as **
  • Reaching for high-hanging fruit in drug discovery at protein–protein interfaces
    Nature, Vol. 450, No. 7172. (12 December 2007), pp. 1001-1009.
    by James A Wells, Christopher L Mcclendon
    posted to drug interactome by jyuh on 2008-08-18 14:30:07 as ** along with 5 people cjeans chgjb phoenixzxl higueruelo bicko
  • Identifying gene-disease associations using centrality on a literature mined gene-interaction network
    Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i277-285.
    by Arzucan Ozgur, Thuy Vu, Gunes Erkan, Dragomir R Radev
    posted to candidate-gene genetics interactome pubmed text-mining by jyuh on 2008-08-17 04:00:43 as ** along with 1 person maralena
  • Integrating protein-protein interactions and text mining for protein function prediction
    BMC Bioinformatics, Vol. 9, No. Suppl 8. (2008)
    by Samira Jaeger, Sylvain Gaudan, Ulf Leser, Dietrich R Schuhmann
    posted to function interactome text-mining by jyuh on 2008-08-17 03:53:03 as ** along with 3 people bootsy reyez phoenixzxl
  • Protein interactions in human genetic diseases
    Genome Biology, Vol. 9, No. 1. (2008)
    by Benjamin S Bockler, Alex Bateman
    posted to genetics interactome by jyuh on 2008-08-17 02:12:38 as ** along with 10 people and 2 groups barry balicea frohike neils grahamc aconesa biomcgary barriot mingzhi mclarenv Bioinformatics McCammon
  • Protein-protein interactions and membrane localization of the human organic solute transporter.
    American journal of physiology. Gastrointestinal and liver physiology, Vol. 292, No. 6. (June 2007)
    by AQ Sun, N Balasubramaniyan, K Xu, CJ Liu, VM Ponamgi, H Liu, FJ Suchy
    posted to interactome oat by jyuh on 2008-08-16 07:47:19 as **
  • Supervised inference of gene-regulatory networks
    BMC Bioinformatics, Vol. 9 (04 January 2008), 2.
    by Cuong C To, Jiri Vohradsky
    posted to interactome promoter by jyuh on 2008-08-16 01:44:50 as ** along with 2 people shigepong gracio
  • Protein-protein interactions: from global to local analyses.
    Current opinion in biotechnology (6 August 2008)
    by Wp Kelly, Mph Stumpf
    posted to interactome by jyuh on 2008-08-14 14:48:32 as **
  • Searching the Protein Interaction Space Through the MINT Database.
    Methods in molecular biology (Clifton, N.J.), Vol. 484 (2008), pp. 305-317.
    by A Chatr-Aryamontri, A Zanzoni, A Ceol, G Cesareni
    posted to interactome by jyuh on 2008-08-14 14:24:05 as **
  • Binding MOAD, a high-quality protein-ligand database.
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
    by ML Benson, RD Smith, NA Khazanov, B Dimcheff, J Beaver, P Dresslar, J Nerothin, HA Carlson
    posted to interactome by jyuh on 2008-08-14 14:23:17 as ** along with 2 people massivemayhem higueruelo
  • PhosphoPOINT: a comprehensive human kinase interactome and phospho-protein database.
    Bioinformatics (Oxford, England), Vol. 24, No. 16. (15 August 2008)
    by CY Yang, CH Chang, YL Yu, TC Lin, SA Lee, CC Yen, JM Yang, JM Lai, YR Hong, TL Tseng, KM Chao, CY Huang
    posted to interactome kinase phosphorylation by jyuh on 2008-08-14 14:08:46 as ** along with 1 person grahamc
  • Bacteriome.org--an integrated protein interaction database for E. coli.
    Nucleic acids research, Vol. 36, No. Database issue. (January 2008)
    by C Su, JM Peregrin-Alvarez, G Butland, S Phanse, V Fong, A Emili, J Parkinson
    posted to bacteria interactome by jyuh on 2008-08-14 13:44:14 as **
  • DOMINE: a database of protein domain interactions.
    Nucleic acids research, Vol. 36, No. Database issue. (January 2008)
    by B Raghavachari, A Tasneem, TM Przytycka, R Jothi
    posted to interactome by jyuh on 2008-08-14 13:43:53 as ** along with 2 people carlk marck
  • DIMA 2.0 predicted and known domain interactions.
    Nucleic Acids Res (13 November 2007)
    by Philipp Pagel, Matthias Oesterheld, Oksana Tovstukhina, Norman Strack, Volker Stümpflen, Dmitrij Frishman
    posted to interactome by jyuh on 2008-08-14 13:43:06 as ** along with 2 people chad_davis kintoki
  • PDZBase: a protein-protein interaction database for PDZ-domains.
    Bioinformatics, Vol. 21, No. 6. (March 2005), pp. 827-828.
    by T Beuming, L Skrabanek, MY Niv, P Mukherjee, H Weinstein
    posted to interactome pdz by jyuh on 2008-08-14 13:38:07 as ** along with 2 people and 1 group pdelosri IrinaMoreira EPFL_SB_ITP_LBS
  • PepCyber:P~PEP: a database of human protein protein interactions mediated by phosphoprotein-binding domains.
    Nucleic acids research, Vol. 36, No. Database issue. (January 2008)
    by W Gong, D Zhou, Y Ren, Y Wang, Z Zuo, Y Shen, F Xiao, Q Zhu, A Hong, X Zhou, X Gao, T Li
    posted to interactome by jyuh on 2008-08-14 13:26:13 as ** along with 1 person renatomilani
  • A General System for Studying Protein−Protein Interactions in Gram-Negative Bacteria
    J. Proteome Res. (1 July 2008)
    by Dale A Pelletier, Gregory B Hurst, Linda J Foote, Patricia K Lankford, Catherine K Mckeown, Tse-Yuan Lu, Denise D Schmoyer, Manesh B Shah, Judson W Hervey, Hayes W Mcdonald, Brian S Hooker, William R Cannon, Don S Daly, Jason M Gilmore, Steven H Wiley, Deanna L Auberry, Yisong Wang, Frank W Larimer, Stephen J Kennel, Mitchel J Doktycz, Jennifer L Morrell-Falvey, Elizabeth T Owens, Michelle V Buchanan
    posted to interactome by jyuh on 2008-08-12 11:11:32 as ** along with 2 people neils brianb
  • Fluorescence-based methods in the study of protein-protein interactions in living cells.
    Current opinion in biotechnology (14 July 2008)
    by Francisco Ciruela
    posted to bifc interactome by jyuh on 2008-08-10 02:13:12 as **
  • Monitoring the interference of protein-protein interactions in vivo by bimolecular fluorescence complementation: the DnaK case.
    Proteomics (6 August 2008)
    by Montse Morell, Patricia Czihal, Ralf Hoffmann, Laszlo Otvos, Francesc X X Avilés, Salvador Ventura
    posted to bifc interactome by jyuh on 2008-08-10 02:09:06 as **
  • Construction of a cancer-perturbed protein-protein interaction network for discovery of apoptosis drug targets
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Liang H Chu, Bor S Chen
    posted to cancer interactome by jyuh on 2008-08-10 00:46:25 as ** along with 2 people reyez renatomilani
  • Global investigation of protein-protein interactions in yeast Saccharomyces cerevisiae using re-occurring short polypeptide sequences
    Nucl. Acids Res. (27 June 2008), gkn390.
    by S Pitre, C North, M Alamgir, M Jessulat, A Chan, X Luo, JR Green, M Dumontier, F Dehne, A Golshani
    posted to interactome yeast by jyuh on 2008-08-09 16:58:45 as ** along with 4 people brianb neils pansapiens renatomilani
  • Analysis of Transient Phosphorylation-Dependent Protein-Protein Interactions in Living Mammalian Cells Using Split-TEV
    BMC Biotechnology, Vol. 8 (13 July 2008), 55.
    by Michael C Wehr, Lisa Reinecke, Anna Botvinnik, Moritz J Rossner
    posted to split-tev phosphorylation interactome by jyuh on 2008-08-09 16:53:55 as **
  • The BioGRID Interaction Database: 2008 update.
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
    by BJ Breitkreutz, C Stark, T Reguly, L Boucher, A Breitkreutz, M Livstone, R Oughtred, DH Lackner, J Bähler, V Wood, K Dolinski, M Tyers
    posted to database interactome by jyuh on 2008-08-09 11:03:46 as **
  • High-throughput genetic interaction mapping in the fission yeast Schizosaccharomyces pombe
    Nature Methods, Vol. 4, No. 10. (23 September 2007), pp. 861-866.
    by Assen Roguev, Marianna Wiren, Jonathan S Weissman, Nevan J Krogan
    posted to interactome yeast by jyuh on 2008-08-09 02:07:47 as ** along with 5 people dchughes cjeans zwang kdang marck
  • Two-hybrid technologies in proteomics research.
    Current opinion in biotechnology (23 July 2008)
    by Bernhard Suter, Saranya Kittanakom, Igor Stagljar
    posted to interactome y2h by jyuh on 2008-08-09 01:51:53 as **
  • Linking functionally related genes by sensitive and quantitative characterization of genetic interaction profiles
    Proceedings of the National Academy of Sciences, Vol. 105, No. 15. (15 April 2008), pp. 5821-5826.
    by Laurence Decourty, Cosmin Saveanu, Kenza Zemam, Florence Hantraye, Emmanuel Frachon, Jean-Claude Rousselle, Micheline Fromont-Racine, Alain Jacquier
    posted to interactome yeast by jyuh on 2008-08-08 16:50:41 as ** along with 2 people tmmurali raiyar
  • High-throughput, quantitative analyses of genetic interactions in E. coli.
    Nature methods (1 August 2008)
    by Athanasios Typas, Robert J J Nichols, Deborah A A Siegele, Michael Shales, Sean R R Collins, Bentley Lim, Hannes Braberg, Natsuko Yamamoto, Rikiya Takeuchi, Barry L L Wanner, Hirotada Mori, Jonathan S S Weissman, Nevan J J Krogan, Carol A A Gross
    posted to interactome by jyuh on 2008-08-08 16:42:12 as ** along with 1 person carlk
  • Defining genetic interaction
    Proceedings of the National Academy of Sciences, Vol. 105, No. 9. (4 March 2008), pp. 3461-3466.
    by Ramamurthy Mani, St, John L Hartman, Guri Giaever, Frederick P Roth
    posted to interactome by jyuh on 2008-08-08 16:41:09 as ** along with 4 people tmmurali caseybrown inesdesantiago carlk
  • Identifying functional modules in protein-protein interaction networks: an integrated exact approach.
    Bioinformatics (Oxford, England), Vol. 24, No. 13. (1 July 2008)
    by MT Dittrich, GW Klau, A Rosenwald, T Dandekar, T Müller
    posted to interactome by jyuh on 2008-08-08 16:29:18 as ** along with 2 people marck bootsy
  • Discerning static and causal interactions in genome-wide reverse engineering problems.
    Bioinformatics (Oxford, England) (8 May 2008)
    by M Zampieri, N Soranzo, C Altafini
    posted to interactome by jyuh on 2008-08-08 16:28:55 as ** along with 4 people roys tmmurali verdicchio balicea
  • Kernel approaches for genic interaction extraction.
    Bioinformatics (Oxford, England), Vol. 24, No. 1. (1 January 2008), pp. 118-126.
    by S Kim, J Yoon, J Yang
    posted to interactome by jyuh on 2008-08-08 15:31:02 as ** along with 2 people TheresaNiederberger gilesc
  • Hubba: hub objects analyzer--a framework of interactome hubs identification for network biology.
    Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008)
    by CY Lin, CH Chin, HH Wu, SH Chen, CW Ho, MT Ko
    posted to interactome network by jyuh on 2008-08-08 11:23:59 as **
  • PIE: an online prediction system for protein-protein interactions from text
    Nucl. Acids Res. (28 May 2008), gkn281.
    by Sun Kim, Soo-Yong Shin, In-Hee Lee, Soo-Jin Kim, Ram Sriram, Byoung-Tak Zhang
    posted to interactome by jyuh on 2008-07-25 16:20:30 as ** along with 3 people neils satre tharris
  • Bimolecular Fluorescence Complementation (BiFC) Analysis as a Probe of Protein Interactions in Living Cells
    Annual Review of Biophysics, Vol. 37, No. 1. (2008), pp. 465-487.
    by Tom K Kerppola
    posted to bifc interactome by jyuh on 2008-07-17 16:14:44 as ** along with 1 person zwang
  • Increasing the reliability of protein interactomes.
    Drug discovery today (30 June 2008)
    by Hon Nian N Chua, Limsoon Wong
    posted to interactome by jyuh on 2008-07-09 09:48:16 as ** along with 2 people marck zimbo1
  • Label-free and dynamic detection of biomolecular interactions for high-throughput microarray applications.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 23. (10 June 2008), pp. 7988-7992.
    by E Ozkumur, JW Needham, DA Bergstein, R Gonzalez, M Cabodi, JM Gershoni, BB Goldberg, MS Unlü
    posted to interactome protein-microarray by jyuh on 2008-07-05 00:24:28 as **
  • Mass spectrometric identification of formaldehyde-induced peptide modifications under in vivo protein cross-linking conditions.
    Analytica chimica acta, Vol. 618, No. 2. (23 June 2008), pp. 168-183.
    by J Toews, JC Rogalski, TJ Clark, J Kast
    posted to interactome by jyuh on 2008-07-03 09:47:06 as ** along with 1 person brianb
  • Interactive proteomics: what lies ahead?
    BioTechniques, Vol. 44, No. 5. (April 2008), pp. 681-691.
    by B Suter, S Kittanakom, I Stagljar
    posted to interactome by jyuh on 2008-07-03 09:31:18 as **
  • A general and rapid cell-free approach for the interrogation of protein-protein, protein-DNA, and protein-RNA interactions and their antagonists utilizing split-protein reporters.
    Journal of the American Chemical Society, Vol. 130, No. 20. (21 May 2008), pp. 6488-6497.
    by JR Porter, CI Stains, BW Jester, I Ghosh
    posted to split-tev interactome emsa by jyuh on 2008-07-02 09:03:39 as **
  • Mapping the human protein interactome.
    Cell research (24 June 2008)
    by Daniel Figeys
    posted to interactome by jyuh on 2008-07-02 09:00:37 as ** along with 1 person renatomilani
  • Resolving the network of cell signaling pathways using the evolving yeast two-hybrid system.
    BioTechniques, Vol. 44, No. 5. (April 2008), pp. 655-662.
    by V Ratushny, E Golemis
    posted to interactome y2h by jyuh on 2008-07-02 08:58:40 as **
  • Charting plant interactomes: possibilities and challenges.
    Trends in plant science, Vol. 13, No. 4. (April 2008), pp. 183-191.
    by M Morsy, S Gouthu, S Orchard, D Thorneycroft, JF Harper, R Mittler, JC Cushman
    posted to interactome by jyuh on 2008-07-02 08:44:07 as **
  • The MoVIN server for the analysis of protein interaction networks.
    BMC bioinformatics, Vol. 9 Suppl 2 (2008)
    by P Marcatili, G Bussotti, A Tramontano
    posted to interactome by jyuh on 2008-07-02 08:43:21 as ** along with 3 people kluck maralena carlk
  • A Bayesian Estimator of Protein-Protein Association Probabilities
    Bioinformatics (22 May 2008), btn238.
    by JM Gilmore, DL Auberry, JL Sharp, AM White, KK Anderson, DS Daly
    posted to bayes interactome by jyuh on 2008-06-05 03:08:09 as ** along with 2 people zwang renatomilani
  • A copula method for modeling directional dependence of genes
    BMC Bioinformatics, Vol. 9 (01 May 2008), 225.
    by Jong-Min Kim, Yoon-Sung Jung, Engin A Sungur, Kap-Hoon Han, Changyi Park, Insuk Sohn
    posted to copula interactome microarray by jyuh on 2008-05-18 04:15:58 as ** along with 1 person chodar
  • Walking the Interactome for Prioritization of Candidate Disease Genes
    The American Journal of Human Genetics, Vol. In Press, Corrected Proof
    by Sebastian Kohler, Sebastian Bauer, Denise Horn, Peter N Robinson
    posted to candidate-gene genetics interactome microaray by jyuh on 2008-05-18 04:03:27 as ** along with 4 people jfr kluck daed raiyar
  • An in Vivo Map of the Yeast Protein Interactome
    Science (8 May 2008), 1153878.
    by Kirill Tarassov, Vincent Messier, Christian R Landry, Stevo Radinovic, Mercedes M Molina, Igor Shames, Yelena Malitskaya, Jackie Vogel, Howard Bussey, Stephen W Michnick
    posted to interactome yeast by jyuh on 2008-05-18 02:42:21 as ** along with 7 people phoenixzxl cabbagesofdoom neils aubinhon brianb tmmurali grahamc
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