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jonathanjacobs' library [44 articles]

Senaste artiklarna i jonathanjacobs' bibliotek ordnat efter prioritet.
  • Size, constant sequences, and optimal selection
    RNA, Vol. 11, No. 11. (1 November 2005), pp. 1701-1709.
    by Michal Legiewicz, Catherine Lozupone, ROB Knight, Michael Yarus
    posted to structure selex rna evolution dna aptamer by jonathanjacobs on 2008-07-17 21:50:32 as ***** along with 1 group Molecular Biology
  • High-Throughput SHAPE Analysis Reveals Structures in HIV-1 Genomic RNA Strongly Conserved across Distinct Biological States
    PLoS Biology, Vol. 6, No. 4. (1 April 2008), e96.
    by Kevin A Wilkinson, Robert J Gorelick, Suzy M Vasa, Nicolas Guex, Alan Rein, David H Mathews, Morgan C Giddings, Kevin M Weeks
    posted to virus trna transcriptome transcriptase structure shape sequence rnaprotein rna ribosome retroviral protein primer nucleotide nucleocapsid noncoding native nascent motif human homolog hiv genomics genome function fold dna by jonathanjacobs on 2008-05-08 16:40:11 as ***** along with 1 person and 1 group kieran101 Molecular Biology
  • The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression
    FEBS Journal, Vol. 272, No. 9. (2005), pp. 2118-2131.
    by Christophe Maris, Cyril Dominguez, Frederic HT Allain
    posted to conserved eukaryotes function motif protein review ribonucleoprotein rna rnp rrm sequences structure by jonathanjacobs on 2008-04-10 16:51:30 as ***** along with 1 person and 2 groups marck Molecular Biology The La Autoantigen.
  • Genomic systematic evolution of ligands by exponential enrichment (Genomic SELEX) for the identification of protein-binding RNAs independent of their expression levels
    Nat. Protocols, Vol. 1, No. 5. (December 2006), pp. 2204-2212.
    by Christina Lorenz, Frederike von Pelchrzim, Renee Schroeder
    posted to transcription selex rna protocol protein pcr genomics gene expression experimental evolution dna affinity by jonathanjacobs on 2008-05-14 01:36:45 as **** along with 1 group Molecular Biology
  • Identification of novel posttranscriptional targets of the BCR/ABL oncoprotein by ribonomics: requirement of E2F3 for BCR/ABL leukemogenesis
    Blood, Vol. 111, No. 2. (15 January 2008), pp. 816-828.
    by Anna M Eiring, Paolo Neviani, Ramasamy Santhanam, Joshua J Oaks, Ji S Chang, Mario Notari, William Willis, Carlo Gambacorti-Passerini, Stefano Volinia, Guido Marcucci, Michael A Caligiuri, Gustavo W Leone, Danilo Perrotti
    posted to apoptotic cell conserved development differentiation expression function hnrnpa kinase knockdown leukemia marrow mice mrna myelogenous myeloid network oncoprotein posttranscriptional posttranslational protein rbps regulation rna shrna stimuli survival transcription untranslated upregulated utr vivo by jonathanjacobs on 2008-04-18 22:55:15 as **** along with 1 group The La Autoantigen.
  • La protein has a positive effect on the translation of TOP mRNAs in vivo
    Nucl. Acids Res., Vol. 28, No. 15. (1 August 2000), pp. 2927-2934.
    by Claudia Crosio, Pietro P Boyl, Fabrizio Loreni, Paola Pierandrei-Amaldi, Francesco Amaldi
    posted to hypothesis la mrna oligopyrimidine plasmid protein ribosome translation utr vertebrates xenopus genes by jonathanjacobs on 2008-03-31 16:07:08 as **** along with 1 group The La Autoantigen.
  • Posttranscriptional Gene Regulation by Spatial Rearrangement of the 3′ Untranslated Region
    PLoS Biology, Vol. 6, No. 4. (1 April 2008), e92.
    by Andrea B Eberle, Lukas Stalder, Hansruedi Mathys, Rodolfo Z Orozco, Oliver Mühlemann
    posted to untranslated translation termination regulation ptc protein posttranscriptional polyabinding polya pathway pabpc nonsensemediated nmd mrna mechanism human gene function folding evolution degradation decay conserved codon cell by jonathanjacobs on 2008-04-30 15:38:52 as *** along with 1 group PROTEIN TRANSLATION
  • The multifunctional RNA-binding protein La is required for mouse development and for the establishment of embryonic stem cells.
    Mol Cell Biol, Vol. 26, No. 4. (February 2006), pp. 1445-1451.
    by JM Park, MJ Kohn, MW Bruinsma, C Vech, RV Intine, S Fuhrmann, A Grinberg, I Mukherjee, PE Love, MS Ko, ML DePamphilis, RJ Maraia
    posted to biogenesis cell cells cerevisiae development embryonic erythematosus eukaryote gene la lupus mice mrna noncoding polymerase pombe protein ribosome rna saccharomyces schizosaccharomyces sjogrens snornas trna yeast by jonathanjacobs on 2008-03-31 21:28:15 as *** along with 1 person and 1 group miguel The La Autoantigen.
  • RACK1 mRNA translation is regulated via a rapamycin-sensitive pathway and coordinated with ribosomal protein synthesis
    FEBS Letters, Vol. 579, No. 25. (24 October 2005), pp. 5517-5520.
    by Fabrizio Loreni, Valentina Iadevaia, Elisa Tino, Sara Caldarola, Francesco Amaldi
    posted to mrna ribosome top translation by jonathanjacobs on 2008-03-31 16:28:40 as ***
  • Recognition of Nascent RNA by the Human La Antigen: Conserved and Divergent Features of Structure and Function
    Mol. Cell. Biol., Vol. 21, No. 2. (15 January 2001), pp. 367-379.
    by Richard J Maraia, Robert V Intine
    posted to eukaryote apoptosis chaperone evolution la motif mrna phosphoprotein protein rna snrnas structure transcription translation trna virus yeast by jonathanjacobs on 2008-03-27 18:37:20 as *** along with 1 person JamesIben
  • BCR/ABL activates mdm2 mRNA translation via the La antigen
    Cancer Cell, Vol. 3, No. 2. (February 2003), pp. 145-160.
    by Rossana Trotta, Tatiana Vignudelli, Olivia Candini, Robert V Intine, Luisa Pecorari, Clara Guerzoni, Giorgia Santilli, Mike W Byrom, Silvia Goldoni, Lance P Ford, Michael A Caligiuri, Richard J Maraia, Danilo Perrotti, Bruno Calabretta
    posted to la mdm2 mrna translation by jonathanjacobs on 2008-03-27 18:32:34 as *** along with 1 person and 1 group DevilInPgh The La Autoantigen.
  • Nuclear Import and the Evolution of a Multifunctional RNA-binding Protein
    J. Cell Biol., Vol. 143, No. 4. (16 November 1998), pp. 887-899.
    by Jonathan S Rosenblum, Lucy F Pemberton, Neris Bonifaci, Gunter Blobel
    posted to protein nucleus evolution lhp1 rna sla1 by jonathanjacobs on 2008-03-26 15:58:29 as *** along with 1 group The La Autoantigen.
  • Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
    Nature (18 May 2008)
    by Brian T Wilhelm, Samuel Marguerat, Stephen Watt, Falk Schubert, Valerie Wood, Ian Goodhead, Christopher J Penkett, Jane Rogers, Jürg Bähler
    posted to yeast transcriptome transcription sequence schizosaccharomyces rna pombe intron genome gene exon dna cell array by jonathanjacobs on 2008-06-26 12:17:44 as ** along with 6 people and 1 group semrich myourshaw jyuh caseybrown GeeSharpMinor djkt Molecular Biology
  • Diversity of Oligonucleotide Functions
    Annual Review of Biochemistry, Vol. 64, No. 1. (1995), pp. 763-797.
    by L Gold, B Polisky, O Uhlenbeck, M Yarus
    posted to structure selex rna protein oligonucleotide ligands dna by jonathanjacobs on 2008-06-23 16:20:18 as **
  • Identification of RNA ligands that bind hepatitis C virus polymerase selectively and inhibit its RNA synthesis from the natural viral RNA templates
    Virology, Vol. 307, No. 2. (15 March 2003), pp. 301-316.
    by Nam V Vo, Jong-Won Oh, Michael M Lai
    posted to viral structure sequence selex rna pyrimidine purine protein polymerase nucleotide ligand hcv evolution conserved aptamer by jonathanjacobs on 2008-06-16 15:11:45 as **
  • Downregulation of the essential Trypanosoma brucei La protein affects accumulation of elongator methionyl-tRNA
    Molecular and Biochemical Parasitology, Vol. 144, No. 1. (November 2005), pp. 104-108.
    by George K Arhin, Shuiyuan Shen, Iehsus F Perez, Christian Tschudi, Elisabetta Ullu
    posted to cerevisiae chaperone conserved cytoplasmic database degradation endonucleolytic eukaryotes eukaryotic evolution experimental function gene homologue human la methionylpretrna microarray molecular motif mrnas nuclear nuclease nucleolar oligou phosphoprotein pol polymerase polyuridine prerrna presl pretrnas protein protozoa ribonucleoprotein rna saccharomyces snorna snrna splicing transcription trna trypanosome by jonathanjacobs on 2008-04-08 19:59:38 as **
  • The Trypanosoma brucei La protein is a candidate poly(U) shield that impacts spliced leader RNA maturation and tRNA intron removal
    International Journal for Parasitology, Vol. 35, No. 4. (1 April 2005), pp. 359-366.
    by Silvie Foldynova-Trantirkova, Zdenek Paris, Nancy R Sturm, David A Campbell, Julius Lukes
    posted to eukaryotic gene intron la lethality methylation motif mrna nuclear nucleolar pathway polyu protein ribosome rna splicing transsplicing trnatyr trypanosoma vector viable yeast by jonathanjacobs on 2008-04-08 19:55:29 as ** along with 1 group The La Autoantigen.
  • Genetic analysis of a La homolog in Drosophila melanogaster
    Nucl. Acids Res., Vol. 28, No. 5. (1 March 2000), pp. 1078-1084.
    by Chunyang Bai, Peter P Tolias
    posted to conserved development drosophila embryo embryonic eukaryote gene genetic homolog hypothesis ires la larvae melanogaster morphogenesis polymerase protein ribosome rna translational vivo by jonathanjacobs on 2008-04-08 19:52:25 as ** along with 1 group The La Autoantigen.
  • A La-Related Protein Modulates 7SK snRNP Integrity to Suppress P-TEFb-Dependent Transcriptional Elongation and Tumorigenesis
    Molecular Cell, Vol. 29, No. 5. (14 March 2008), pp. 588-599.
    by Nanhai He, Nadine S Jahchan, Eunmee Hong, Qiang Li, Mark A Bayfield, Richard J Maraia, Kunxin Luo, Qiang Zhou
    posted to differentiation drosophila homolog human la pips polymerase premrna protein ptefb rna snrna snrnp transcription tumorigenesis nucleus by jonathanjacobs on 2008-03-31 18:13:35 as ** along with 1 group The La Autoantigen.
  • Novel CNBP- and La-based translation control systems for mammalian cells.
    Biotechnol Bioeng, Vol. 81, No. 1. (5 January 2003), pp. 1-12.
    by S Schlatter, M Fussenegger
    posted to initiation ires la mammalian microscopy mrna plasmid promoter protein ribosome structure top transcription translation utr xenopus genes by jonathanjacobs on 2008-03-31 16:43:51 as ** along with 1 person evaf
  • Was the initiation of translation in early eukaryotes IRES-driven?
    Trends in Biochemical Sciences, Vol. 33, No. 2. (February 2008), pp. 58-64.
    by Greco Hernandez
    posted to eukaryote evolution hypothesis intron ires mrna ribosome structure translation viral by jonathanjacobs on 2008-03-31 16:40:19 as ** along with 1 group Molecular Biology
  • Identification of Lhp1p-associated RNAs by microarray analysis in Saccharomyces cerevisiae reveals association with coding and noncoding RNAs
    Proceedings of the National Academy of Sciences, Vol. 101, No. 2. (13 January 2004), pp. 434-439.
    by Maki Inada, Christine Guthrie
    posted to genomics la mrna polymerase protein ribosome rna saccharomyces transcription translation eukaryote trna lhp1 by jonathanjacobs on 2008-03-31 16:37:55 as ** along with 1 group The La Autoantigen.
  • Identification of secondary structure in the 5′-untranslated region of the human adrenomedullin mRNA with implications for the regulation of mRNA translation
    Oncogene, Vol. aop, No. current.
    by F Brenet, N Dussault, C Delfino, F Boudouresque, O Chinot, PM Martin, LH Ouafik
    posted to mrna protein rna structure translation utr by jonathanjacobs on 2008-03-31 16:27:23 as **
  • A Three-Stemmed mRNA Pseudoknot in the SARS Coronavirus Frameshift Signal
    PLoS Biology, Vol. 3, No. 6. (1 June 2005), e172.
    by Ewan P Plant, Gabriela C Pérez-Alvarado, Jonathan L Jacobs, Bani Mukhopadhyay, Mirko Hennig, Jonathan D Dinman
    posted to genetics coronavirus genomics computational database frameshift genbank motif mrna mutagenesis mutation phylogenetic predicted protein pseudoknot ribosome rna structure viral by jonathanjacobs on 2008-03-28 04:27:36 as ** along with 1 person physics
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