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jfrs database [38 articles]

Senaste hänvisningarna i jfrs bibliotek insorterade under taggen database. You can also see everyone's database.
  • Keeping pace with the data: 2008 update on the Bioinformatics Links Directory.
    Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008)
    by MD Brazas, JA Fox, T Brown, S McMillan, BF Ouellette
    posted to database bioinformatics by jfr on 2008-09-24 14:25:51 as * along with 3 people nuin jyuh inesdesantiago
  • ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses.
    BMC bioinformatics, Vol. 9 Suppl 6 (2008)
    by TH Stokes, JT Torrance, H Li, MD Wang
    posted to microarray_technology database by jfr on 2008-09-24 13:39:14 as read along with 5 people lptolik yas jyuh thomaskelder GeeSharpMinor
  • CID-miRNA: a web server for prediction of novel miRNA precursors in human genome.
    Biochemical and biophysical research communications, Vol. 372, No. 4. (8 August 2008), pp. 831-834.
    by S Tyagi, C Vaz, V Gupta, R Bhatia, S Maheshwari, A Srinivasan, A Bhattacharya
    posted to mirna database by jfr on 2008-09-15 16:56:58 as **
  • Public Databases and Software for the Pathway Analysis of Cancer Genomes.
    Cancer informatics, Vol. 3 (12 December 2007), pp. 389-407.
    by Ivy F L F Tsui, Raj Chari, Timon P H P Buys, Wan L L Lam
    posted to software review database by jfr on 2008-09-15 13:56:19 as *** along with 1 person aviad_work
  • Is your ?gene of interest? interesting?
    Developmental Dynamics, Vol. 236, No. 10. (2007), pp. 2962-2969.
    by Julie C Kiefer
    posted to genomics database by jfr on 2008-09-03 10:51:47 as *** along with 2 people and 2 groups aviad_work dchughes G4ID Genetics-of-Gambling
  • NCBI GEO standards and services for microarray data
    Nature Biotechnology, Vol. 24, No. 12., pp. 1471-1472.
    by Ron Edgar, Tanya Barrett
    posted to database letter microarray_technology standards by jfr on 2008-07-28 11:33:15 as read along with 2 people mitko hpiwowar
  • Argonaute--a database for gene regulation by mammalian microRNAs.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by P Shahi, S Loukianiouk, A Bohne-Lang, M Kenzelmann, S Küffer, S Maertens, R Eils, HJ Gröne, N Gretz, B Brors
    posted to database mirna by jfr on 2008-06-27 17:05:34 as read along with 2 people eckart_bindewald maralena
  • MethCancerDB [ndash] aberrant DNA methylation in human cancer
    British Journal of Cancer, Vol. aop, No. current. (05 February 2008)
    by M Lauss, I Visne, A Weinhaeusel, K Vierlinger, C Noehammer, A Kriegner
    posted to database methylation by jfr on 2008-06-20 16:47:56 as **
  • Many Microbe Microarrays Database: uniformly normalized Affymetrix compendia with structured experimental metadata
    Nucl. Acids Res. (11 October 2007), gkm815.
    by Jeremiah J Faith, Michael E Driscoll, Vincent A Fusaro, Elissa J Cosgrove, Boris Hayete, Frank S Juhn, Stephen J Schneider, Timothy S Gardner
    posted to affy bioinformatics database gene_expression by jfr on 2008-06-13 14:42:32 as read along with 1 person tvdbulck
  • JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update.
    Nucleic Acids Res (15 November 2007)
    by Jan Christian C Bryne, Eivind Valen, Man-Hung Eric H Tang, Troels Marstrand, Ole Winther, Isabelle da Piedade, Anders Krogh, Boris Lenhard, Albin Sandelin
    posted to database tfbs by jfr on 2008-05-16 10:03:56 as ** along with 4 people jyuh dullhunk idonaldson sci91078
  • Human Proteinpedia enables sharing of human protein data
    Nature Biotechnology, Vol. 26, No. 2., pp. 164-167.
    by Suresh Mathivanan, Mukhtar Ahmed, Natalie G Ahn, Hainard Alexandre, Ramars Amanchy, Philip C Andrews, Joel S Bader, Brian M Balgley, Marcus Bantscheff, Keiryn L Bennett, Erik Björling, Blagoy Blagoev, Ron Bose, Samir K Brahmachari, Alma S Burlingame, Xosé R Bustelo, Gerard Cagney, Greg T Cantin, Helene L Cardasis, Julio E Celis, Raghothama Chaerkady, Feixia Chu, Philip A Cole, Catherine E Costello, Robert J Cotter, David Crockett, James P Delany, Angelo M De Marzo, Leroi V Desouza, Eric W Deutsch, Eric Dransfield, Gerard Drewes, Arnaud Droit, Michael J Dunn, Kojo Elenitoba-Johnson, Rob M Ewing, Jennifer Van Eyk, Vitor Faca, Jayson Falkner, Xiangming Fang, Catherine Fenselau, Daniel Figeys, Pierre Gagné, Cecilia Gelfi, Kris Gevaert, Jeffrey M Gimble, Florian Gnad, Renu Goel, Pavel Gromov, Samir M Hanash, William S Hancock, HC Harsha, Gerald Hart, Faith Hays, Fuchu He, Prashantha Hebbar, Kenny Helsens, Heiko Hermeking, Winston Hide, Karin Hjernø, Denis F Hochstrasser, Oliver Hofmann, David M Horn, Ralph H Hruban, Nieves Ibarrola, Peter James, Ole N Jensen, Pia H Jensen, Peter Jung, Kumaran Kandasamy, Indu Kheterpal, Reiko F Kikuno, Ulrike Korf, Roman Körner, Bernhard Kuster, Min-Seok Kwon, Hyoung-Joo Lee, Young-Jin Lee, Michael Lefevre, Minna Lehvaslaiho, Pierre Lescuyer, Fredrik Levander, Megan S Lim, Christian Löbke, Joseph A Loo, Matthias Mann, Lennart Martens, Juan Martinez-Heredia, Mark Mccomb, James Mcredmond, Alexander Mehrle, Rajasree Menon, Christine A Miller, Harald Mischak, Sujatha S Mohan, Riaz Mohmood, Henrik Molina, Michael F Moran, James D Morgan, Robert Moritz, Martine Morzel, David C Muddiman, Anuradha Nalli, Daniel J Navarro, Thomas A Neubert, Osamu Ohara, Rafael Oliva, Gilbert S Omenn, Masaaki Oyama, Young-Ki Paik, Kyla Pennington, Rainer Pepperkok, Balamurugan Periaswamy, Emanuel F Petricoin, Guy G Poirier, Keshava TS Prasad, Samuel O Purvine, Abdul B Rahiman, Prasanna Ramachandran, YL Ramachandra, Robert H Rice, Jens Rick, Ragna H Ronnholm, Johanna Salonen, Jean-Charles Sanchez, Thierry Sayd, Beerelli Seshi, Kripa Shankari, Shi J Sheng, Vivekananda Shetty, K Shivakumar, Richard J Simpson, Ravi Sirdeshmukh, Michael KW Siu, Jeffrey C Smith, Richard D Smith, David J States, Sumio Sugano, Matthew Sullivan, Giulio Superti-Furga, Maarit Takatalo, Visith Thongboonkerd, Jonathan C Trinidad, Mathias Uhlen, Joël Vandekerckhove, Julian Vasilescu, Timothy D Veenstra, José-Manuel Vidal-Taboada, Mauno Vihinen, Robin Wait, Xiaoyue Wang, Stefan Wiemann, Billy Wu, Tao Xu, John R Yates, Jun Zhong, Ming Zhou, Yunping Zhu, Petra Zurbig, Akhilesh Pandey
    posted to annotation database protein_interaction proteomics resource by jfr on 2008-04-30 16:55:49 as read along with 5 people jyuh tmmurali dullhunk jdiezperezj drbal
  • GSE: a comprehensive database system for the representation, retrieval, and analysis of microarray data.
    Pac Symp Biocomput (2008), pp. 539-550.
    by T Danford, A Rolfe, D Gifford
    posted to chip-chip database software by jfr on 2008-04-30 16:53:52 as ** along with 2 people idonaldson jyuh
  • EzArray: a web-based highly automated Affymetrix expression array data management and analysis system
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Yuerong Zhu, Yuelin Zhu, Wei Xu
    posted to affy database software by jfr on 2008-04-28 15:32:03 as ** along with 5 people and 1 group Zephyrus jyuh cannin heliopais zhouyu Roswell Cancer Crosstalk
  • miRGator: an integrated system for functional annotation of microRNAs.
    Nucleic Acids Res (16 October 2007)
    by Seungyoon Nam, Bumjin Kim, Seokmin Shin, Sanghyuk Lee
    posted to database mirna resource by jfr on 2008-04-09 14:28:06 as read along with 2 people ealloza maralena
  • miRBase: tools for microRNA genomics.
    Nucleic Acids Res (8 November 2007)
    by Sam Griffiths-Jones, Harpreet Kaur K Saini, Stijn van V Dongen, Anton J J Enright
    posted to database mirna resource by jfr on 2008-04-09 14:27:07 as read along with 4 people ealloza giovenko jyuh cabbagezs
  • The microRNA.org resource: targets and expression.
    Nucleic Acids Res (23 December 2007)
    by Doron Betel, Manda Wilson, Aaron Gabow, Debora S S Marks, Chris Sander
    posted to database mirna resource by jfr on 2008-04-09 14:25:59 as read along with 4 people jyuh heliopais maralena bootsy
  • Pancreatic Expression database: a generic model for the organization, integration and mining of complex cancer datasets
    BMC Genomics, Vol. 8 (28 November 2007), 439.
    by Claude Chelala, Stephan A Hahn, Hannah J Whiteman, Sayka Barry, Deepak Hariharan, Tomasz P Radon, Nicholas R Lemoine, Tatjana Crnogorac-Jurcevic
    posted to bioinformatics database gene_expression integration by jfr on 2008-04-09 13:40:06 as read along with 1 person and 1 group shikin GeneGo
  • SGDI: system for genomic data integration.
    Pac Symp Biocomput (2008), pp. 141-152.
    by VJ Carey, J Gentry, R Sarkar, D Gentleman, S Ramaswamy
    posted to bioinformatics database integration meta-analysis by jfr on 2008-04-09 12:51:42 as read along with 2 people imina jyuh
  • KUTE-BASE: Storing, downloading and exporting MIAME-compliant microarray experiments in minutes rather than hours.
    Bioinformatics (17 November 2007)
    by Sorin Draghici, Adi L L Tarca, Longfei Yu, Stephen Ethier, Roberto Romero
    posted to database software by jfr on 2008-02-29 17:03:30 as read along with 1 person jyuh
  • CanGEM: mining gene copy number changes in cancer.
    Nucleic Acids Res (11 October 2007)
    by Ilari Scheinin, Samuel Myllykangas, Ioana Borze, Tom Böhling, Sakari Knuutila, Juha Saharinen
    posted to copy-number database by jfr on 2008-02-15 14:17:58 as *** along with 2 people and 1 group Terkko frohike Bioinformatics
  • ACTuDB, a new database for the integrated analysis of array-CGH and clinical data for tumors
    Oncogene, Vol. aop, No. current.
    by P Hupé, P La Rosa, S Liva, S Lair, N Servant, E Barillot
    posted to array-cgh copy-number database by jfr on 2008-02-07 09:52:30 as read along with 2 people frohike blackm0k
  • DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis
    BMC Bioinformatics, Vol. 8 (02 November 2007), 426.
    by Brad T Sherman, Da W Huang, Qina Tan, Yongjian Guo, Stephan Bour, David Liu, Robert Stephens, Michael W Baseler, Clifford H Lane, Richard A Lempicki
    posted to annotation database functional_analysis by jfr on 2008-02-04 10:52:19 as read along with 4 people and 1 group jyuh ealloza barriot hpaces BioinfoCIPF
  • The Stanford Tissue Microarray Database.
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
    by RJ Marinelli, K Montgomery, CL Liu, NH Shah, W Prapong, M Nitzberg, ZK Zachariah, GJ Sherlock, Y Natkunam, RB West, M van de Rijn, PO Brown, CA Ball
    posted to database tma by jfr on 2008-02-04 10:47:43 as *
  • UniHI: an entry gate to the human protein interactome.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by G Chaurasia, Y Iqbal, C Hänig, H Herzel, EE Wanker, ME Futschik
    posted to database protein_interaction by jfr on 2007-12-18 13:10:56 as read along with 3 people jyuh massivemayhem grahamc
  • AILUN: reannotating gene expression data automatically
    Nat Meth, Vol. 4, No. 11. (November 2007), pp. 879-879.
    by Rong Chen, Li Li, Atul J Butte
    posted to annotation database by jfr on 2007-12-18 13:04:22 as read along with 3 people and 1 group tmmurali incovoma jyuh csb_journal_club_public
  • A systems biology approach for pathway level analysis
    Genome Res. (4 September 2007), gr.6202607.
    by Sorin Draghici, Purvesh Khatri, Adi L Tarca, Kashyap Amin, Arina Done, Calin Voichita, Constantin Georgescu, Roberto Romero
    posted to database pathway_analysis software by jfr on 2007-12-07 15:02:14 as ** along with 16 people and 3 groups pengchy tmmurali dragonrez gurkanbebek grahamc shigepong zwang cabbagezs cerami xingxu shikin idonaldson Pao-Yang thomaskelder heliopais AlexanderPico Bioinformatics ParkinsonLab_at_MaRS OPIG
  • DAVID Gene Functional Classification Tool: A novel biological module-centric algorithm to functionally analyze large gene list
    Genome Biology, Vol. 8 (04 September 2007), R183.
    by Da W Huang, Brad T Sherman, Qina Tan, Jack R Collins, Gregory W Alvord, Jean Roayaei, Robert Stephens, Michael W Baseler, Clifford H Lane, Richard A Lempicki
    posted to annotation database functional_classification by jfr on 2007-12-07 14:44:02 as read along with 7 people ndiaz jyuh aalibes dragonrez rdiaz mellabee heliopais
  • CellMontage: similar expression profile search server.
    Bioinformatics, Vol. 23, No. 22. (15 November 2007), pp. 3103-3104.
    by W Fujibuchi, L Kiseleva, T Taniguchi, H Harada, P Horton
    posted to database software by jfr on 2007-12-07 13:31:36 as read along with 1 person jyuh
  • miRAS: a data processing system for miRNA expression profiling study
    BMC Bioinformatics, Vol. 8 (04 August 2007), 285.
    by Feng Tian, Huayue Zhang, Xinyu Zhang, Chi Song, Yongjing Xia, Yiqing Wu, Xiangjun Liu
    posted to database mirna by jfr on 2007-12-04 15:26:06 as ** along with 2 people mfabbri srp33
  • GeneTrail--advanced gene set enrichment analysis.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007)
    by C Backes, A Keller, J Kuentzer, B Kneissl, N Comtesse, YA Elnakady, R Müller, E Meese, HP Lenhof
    posted to database gene_set_analysis software by jfr on 2007-12-04 12:13:34 as *** along with 2 people jyuh heliopais
  • MAGMA: analysis of two-channel microarrays made easy.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007)
    by H Rehrauer, S Zoller, R Schlapbach
    posted to database software two-color by jfr on 2007-12-04 12:10:27 as * along with 1 person jyuh
  • VisANT 3.0: new modules for pathway visualization, editing, prediction and construction.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007)
    by Z Hu, DM Ng, T Yamada, C Chen, S Kawashima, J Mellor, B Linghu, M Kanehisa, JM Stuart, C DeLisi
    posted to database pathway_analysis by jfr on 2007-12-04 12:02:00 as ** along with 1 person AlexanderPico
  • PathExpress: a web-based tool to identify relevant pathways in gene expression data
    Nucl. Acids Res. (22 June 2007), gkm261.
    by Nicolas Goffard, Georg Weiller
    posted to database pathway_analysis by jfr on 2007-12-04 11:58:45 as * along with 3 people and 1 group jyuh ealloza AlexanderPico BioinfoCIPF
  • Strategy for encoding and comparison of gene expression signatures
    Genome Biology, Vol. 8 (05 July 2007), R133.
    by Yajun Yi, Chun Li, Clay Miller, Alfred L George
    posted to database gene_lists by jfr on 2007-12-04 11:37:18 as ** along with 1 person rdiaz
  • Celsius: a community resource for Affymetrix microarray data
    Genome Biology, Vol. 8 (14 June 2007), R112.
    by Allen Day, Marc RJ Carlson, Jun Dong, Brian D O'Connor, Stanley F Nelson
    posted to database software by jfr on 2007-11-28 13:10:04 as read along with 3 people gpalidwor ghattem orzenil
  • A new advance in alternative splicing databases: from catalogue to detailed analysis of regulation of expression and function of human alternative splicing variants
    BMC Bioinformatics, Vol. 8 (04 June 2007), 180.
    by Pierre, Martin Dutertre, Margot Correa, Didier Auboeuf
    posted to alternative_splicing database by jfr on 2007-11-28 11:49:27 as * along with 1 person jyuh
  • Mediante: a web-based microarray data manager.
    Bioinformatics, Vol. 23, No. 10. (15 May 2007), pp. 1304-1306.
    by K Le Brigand, P Barbry
    posted to database software by jfr on 2007-09-07 11:46:58 as ** along with 1 person jyuh
  • The genopolis microarray database.
    BMC Bioinformatics, Vol. 8 Suppl 1 (2007)
    by A Splendiani, M Brandizi, G Even, O Beretta, N Pavelka, M Pelizzola, M Mayhaus, M Foti, G Mauri, P Ricciardi-Castagnoli
    posted to bioinformatics database by jfr on 2007-07-10 17:14:16 as * along with 1 person jyuh
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