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iris42s library [21 articles]

Senaste artiklarna i iris42s bibliotek.
  • Simple tools for assembling and searching high-density picolitre pyrophosphate sequence data.
    Source code for biology and medicine, Vol. 3 (2008)
    by NJ Parker, AG Parker
    posted to reads short by iris42 on 2008-06-09 12:33:32 as **
  • Velvet: Algorithms for De Novo Short Read Assembly Using De Bruijn Graphs
    Genome Res. (18 March 2008), gr.074492.107.
    by Daniel Zerbino, Ewan Birney
    posted to reads short by iris42 on 2008-06-09 12:31:49 as ** along with 7 people and 1 group stajich farhat tharris Neeperando sharpton GustavoLacerda gdb Berkeley Mycology
  • Tracembler - software for in-silico chromosome walking in unassembled genomes
    BMC Bioinformatics, Vol. 8 (09 May 2007), 151.
    by Qunfeng Dong, Matthew D Wilkerson, Volker Brendel
    posted to reads short by iris42 on 2008-06-09 12:31:11 as **
  • Short read fragment assembly of bacterial genomes
    Genome Res., Vol. 18, No. 2. (1 February 2008), pp. 324-330.
    by Mark J Chaisson, Pavel A Pevzner
    posted to reads short by iris42 on 2008-06-09 12:28:40 as ** along with 5 people azazello GustavoLacerda dandaman caseybrown tharris
  • Assembling millions of short DNA sequences using SSAKE
    Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 500-501.
    by Warren, L Rene, Sutton, G Granger, Jones, JM Steven, Holt, A Robert
    posted to reads short by iris42 on 2008-06-09 12:27:48 as ** along with 4 people azazello nmohelli Neeperando yoonk
  • ALLPATHS: De novo assembly of whole-genome shotgun microreads.
    Genome Res (13 March 2008)
    by Jonathan Butler, Iain Maccallum, Michael Kleber, Ilya A A Shlyakhter, Matthew K K Belmonte, Eric S S Lander, Chad Nusbaum, David B B Jaffe
    posted to reads short by iris42 on 2008-06-09 12:26:56 as ** along with 9 people and 1 group stajich azazello hpaces tharris jwhitney Neeperando sharpton GustavoLacerda GeeSharpMinor Berkeley Mycology
  • Whole-genome sequencing and assembly with high-throughput, short-read technologies.
    PLoS ONE, Vol. 2 (2007)
    by A Sundquist, M Ronaghi, H Tang, P Pevzner, S Batzoglou
    posted to reads short by iris42 on 2008-06-09 12:26:10 as ** along with 3 people and 1 group jyuh azazello nedwards gatech-compgenomics
  • SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing.
    Genome Res, Vol. 17, No. 11. (November 2007), pp. 1697-1706.
    by Juliane C C Dohm, Claudio Lottaz, Tatiana Borodina, Heinz Himmelbauer
    posted to reads short by iris42 on 2008-06-09 12:25:22 as ** along with 8 people and 1 group timflutre stajich ghattem azazello GustavoLacerda niallhaslam flexer jwhitney Berkeley Mycology
  • De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer.
    Genome Res (10 March 2008)
    by David Hernandez, Patrice Francois, Laurent Farinelli, Magne Osteras, Jacques Schrenzel
    posted to reads short by iris42 on 2008-04-01 15:31:44 as ** along with 6 people and 3 groups jmeppley stajich azazello Katje balicea Neeperando microbiology_nijmegen Berkeley Mycology gatech-compgenomics
  • A scan for positively selected genes in the genomes of humans and chimpanzees.
    PLoS Biol, Vol. 3, No. 6. (June 2005)
    by R Nielsen, C Bustamante, AG Clark, S Glanowski, TB Sackton, MJ Hubisz, A Fledel-Alon, DM Tanenbaum, D Civello, TJ White, J J Sninsky, MD Adams, M Cargill
    posted to hars by iris42 on 2008-03-06 13:56:26 as ** along with 6 people and 3 groups stevanspringer jwortman bpb penka hdopazo djkt Nie FAB-lab BioinfoCIPF
  • Initial sequence of the chimpanzee genome and comparison with the human genome
    Nature, Vol. 437, No. 7055., pp. 69-87.
    by The
    posted to hars by iris42 on 2008-03-06 13:55:27 as ** along with 10 people and 3 groups cannin chrn aprasad great_apes indigoviolet dullhunk djkt JeffR100 Garamonfok rvosa biodiversity_conservation EisenLab FAB-lab
  • Localizing Recent Adaptive Evolution in the Human Genome
    PLoS Genetics, Vol. 3, No. 6. (1 June 2007), e90.
    by Scott H Williamson, Melissa J Hubisz, Andrew G Clark, Bret A Payseur, Carlos D Bustamante, Rasmus Nielsen
    posted to hars by iris42 on 2008-03-06 13:54:00 as ** along with 7 people and 2 groups brant dpollard madhadron candypmcg shoshin emarker dmc EisenLab Durbin group
  • A whole genome long-range haplotype (WGLRH) test for detecting imprints of positive selection in human populations.
    Bioinformatics (15 July 2006)
    by Chun Zhang, Dione K K Bailey, Tarif Awad, Guoying Liu, Guoliang Xing, Manqiu Cao, Venu Valmeekam, Jacques Retief, Hajime Matsuzaki, Margaret Taub, Mark Seielstad, Giulia C C Kennedy
    posted to hars by iris42 on 2008-03-06 13:52:42 as ** along with 1 person and 1 group hdopazo BioinfoCIPF
  • Positive Natural Selection in the Human Lineage
    Science, Vol. 312, No. 5780. (16 June 2006), pp. 1614-1620.
    by PC Sabeti, SF Schaffner, B Fry, J Lohmueller, P Varilly, O Shamovsky, A Palma, TS Mikkelsen, D Altshuler, ES Lander
    posted to hars by iris42 on 2008-03-06 13:50:59 as ** along with 7 people and 4 groups dchughes cmm larios hdopazo djkt ramensky jasonflannick FAB-lab G4ID BioinfoCIPF Genetics-of-Gambling
  • Genome-wide detection and characterization of positive selection in human populations
    Nature, Vol. 449, No. 7164. (18 October 2007), pp. 913-918.
    by Pardis C Sabeti, Patrick Varilly, Ben Fry, Jason Lohmueller, Elizabeth Hostetter, Chris Cotsapas, Xiaohui Xie, Elizabeth H Byrne, Steven A Mccarroll, Rachelle Gaudet, Stephen F Schaffner, Eric S Lander
    posted to hars by iris42 on 2008-03-06 13:50:31 as ** along with 7 people brian dchughes djkt ramensky hms ryanraaum jasonflannick
  • A Map of Recent Positive Selection in the Human Genome.
    PLoS Biol, Vol. 4, No. 3. (7 March 2006)
    by Benjamin F F Voight, Sridhar Kudaravalli, Xiaoquan Wen, Jonathan K K Pritchard
    posted to hars by iris42 on 2008-03-06 13:49:47 as ** along with 20 people and 7 groups stevanspringer kentsis bpb balajis indigoviolet ejeffery pradiptaray madhadron breden tiago larios ashandanj hdopazo livingthingdan djkt mbeautru grahamc suizan shoshin dmc Bioinformatics EisenLab FAB-lab SFUAntibodyResearch BioinfoCIPF livingthing Durbin group
  • Natural selection on protein-coding genes in the human genome
    Nature, Vol. 437, No. 7062., pp. 1153-1157.
    by Carlos D Bustamante, Adi Fledel-Alon, Scott Williamson, Rasmus Nielsen, Melissa T Hubisz, Stephen Glanowski, David M Tanenbaum, Thomas J White, John J Sninsky, Ryan D Hernandez, Daniel Civello, Mark D Adams, Michele Cargill, Andrew G Clark
    posted to hars by iris42 on 2008-03-06 13:49:08 as ** along with 15 people and 5 groups stevanspringer operon jwortman aprasad dayjm balajis marcius dpollard hdopazo djkt JBEgwa01 ramensky Garamonfok dmc shoshin EisenLab FAB-lab BioinfoCIPF SGU-CIPF Durbin group
  • Interrogating a high-density SNP map for signatures of natural selection.
    Genome Res, Vol. 12, No. 12. (December 2002), pp. 1805-1814.
    by JM Akey, G Zhang, K Zhang, L Jin, MD Shriver
    posted to hars by iris42 on 2008-03-06 13:48:41 as ** along with 2 people and 1 group hdopazo JBEgwa01 BioinfoCIPF
  • Forces Shaping the Fastest Evolving Regions in the Human Genome
    PLoS Genetics, Vol. 2, No. 10. (1 October 2006), e168.
    by Katherine S Pollard, Sofie R Salama, Bryan King, Andrew D Kern, Tim Dreszer, Sol Katzman, Adam Siepel, Jakob S Pedersen, Gill Bejerano, Robert Baertsch, Kate R Rosenbloom, Jim Kent, David Haussler
    posted to hars by iris42 on 2008-03-06 13:48:02 as ** along with 2 people and 2 groups nickluscombe rvosa EBI-regulation FAB-lab
  • Fast-evolving non-coding sequences in the human genome
    Genome Biology, Vol. 8 (19 June 2007), R118.
    by Christine P Bird, Barbara E Stranger, Maureen Liu, Daryl J Thomas, Catherine E Ingle, Claude Beazley, Webb Miller, Matthew E Hurles, Emmanouil T Dermitzakis
    posted to hars by iris42 on 2008-03-06 13:45:11 as ** along with 5 people and 2 groups djkt Stew jlangdon cisevol bpcusack EisenLab cis-regulatory-evolution
  • Accelerated evolution of conserved noncoding sequences in humans.
    Science, Vol. 314, No. 5800. (3 November 2006)
    by S Prabhakar, JP Noonan, S Pääbo, EM Rubin
    posted to hars by iris42 on 2008-03-06 13:40:57 as ** along with 4 people Archaeogenetics joshuashen rrhudson bpcusack
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