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eskays library [58 articles]

Senaste artiklarna i eskays bibliotek.
  • High-throughput, kingdom-wide prediction and annotation of bacterial non-coding RNAs.
    PLoS ONE, Vol. 3, No. 9. (2008)
    by J Livny, H Teonadi, M Livny, MK Waldor
  • How RNA folds.
    J Mol Biol, Vol. 293, No. 2. (22 October 1999), pp. 271-281.
  • How RNA Unfolds and Refolds
    Annual Review of Biochemistry, Vol. 77, No. 1. (2008), pp. 77-100.
    by Pan TX Li, Jeffrey Vieregg, Ignacio Tinoco
    posted to structure rna folding by eskay on 2008-09-14 00:57:47 as *** along with 1 person aip
  • Human-Specific Gain of Function in a Developmental Enhancer
    Science, Vol. 321, No. 5894. (5 September 2008), pp. 1346-1350.
    by Shyam Prabhakar, Axel Visel, Jennifer A Akiyama, Malak Shoukry, Keith D Lewis, Amy Holt, Ingrid Plajzer-Frick, Harris Morrison, David R Fitzpatrick, Veena Afzal, Len A Pennacchio, Edward M Rubin, James P Noonan
  • The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems.
    EMBO Rep, Vol. 1, No. 1. (July 2000), pp. 18-23.
    by G Varani, WH McClain
    posted to rna secondary structure by eskay on 2008-08-23 22:13:57 as ** along with 1 person evaf
  • Non-coding RNAs: hope or hype?
    Trends in Genetics, Vol. 21, No. 5. (May 2005), pp. 289-297.
    by Alexander Huttenhofer, Peter Schattner, Norbert Polacek
  • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.
    Nature, Vol. 447, No. 7146. (14 June 2007), pp. 799-816.
    by
  • Small is beautiful: microRNAs and breast cancer-where are we now?
    The Journal of pathology, Vol. 215, No. 3. (July 2008), pp. 214-221.
    by E Verghese, A Hanby, V Speirs, T Hughes
    posted to breast cancer mirna by eskay on 2008-08-16 22:18:20 as *** along with 2 people Zephyrus jfr
  • The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
    Cell, Vol. 35, No. 3 Pt 2. (December 1983), pp. 849-857.
    posted to ribozyme rnasep by eskay on 2008-08-16 22:14:39 as **
  • The structure and function of small nucleolar ribonucleoproteins.
    Nucleic acids research, Vol. 35, No. 5. (2007), pp. 1452-1464.
    posted to review snorna by eskay on 2008-08-16 22:06:43 as **
  • The spliceosome: a ribozyme at heart?
    Biological chemistry, Vol. 388, No. 7. (July 2007), pp. 693-697.
    posted to snrna spliceosome by eskay on 2008-08-16 22:04:26 as ***
  • The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C.
    Science, Vol. 311, No. 5758. (13 January 2006), pp. 230-232.
    by S Kishore, S Stamm
    posted to pws snorna by eskay on 2008-08-16 21:58:27 as ** along with 1 person mtagaya
  • Small RNAs encoded within genetic islands of Salmonella typhimurium show host-induced expression and role in virulence
    Nucl. Acids Res., Vol. 36, No. 6. (1 April 2008), pp. 1913-1927.
    by Gilly Padalon-Brauch, Ruth Hershberg, Maya Elgrably-Weiss, Kobi Baruch, Ilan Rosenshine, Hanah Margalit, Shoshy Altuvia
    posted to ncrna salmonella by eskay on 2008-08-16 21:36:36 as *** along with 1 person smbe2008
  • Cancer-associated genomic regions (CAGRs) and noncoding RNAs: bioinformatics and therapeutic implications
    Mammalian Genome
    by Simona Rossi, Cinzia Sevignani, Stephanie Nnadi, Linda Siracusa, George Calin
    posted to cancer mirna ncrna by eskay on 2008-08-16 21:27:48 as ** along with 1 person jfr
  • Rfam: annotating non-coding RNAs in complete genomes.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
  • A computational screen for C/D box snoRNAs in the human genomic region associated with Prader-Willi and Angelman syndromes
    Journal of Biomedical Science
    by Padmavati Sridhar, Hin Gan, Tamar Schlick
    posted to prediction snorna by eskay on 2008-08-15 20:04:48 as **
  • Vertebrate MicroRNA Genes
    Science, Vol. 299, No. 5612. (07 March 2003), 1540.
    by Lee P Lim, Margaret E Glasner, Soraya Yekta, Christopher B Burge, David P Bartel
    posted to mirna mirscan prediction by eskay on 2008-08-15 19:31:28 as ** along with 3 people cassj maryee akiezun
  • Brain-specific small nucleolar RNAs
    Journal of Molecular Neuroscience, Vol. 28, No. 2. (24 February 2006), pp. 103-109.
    by Boris Rogelj
    posted to brain snorna by eskay on 2008-08-15 18:00:58 as **
  • Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs
    EMBO Journal, Vol. 20, No. 14. (16 July 2001), pp. 3617-3622.
    by Tamás Kiss
    posted to ncrna review snorna by eskay on 2008-08-15 17:50:38 as read
  • RNA silencing and genome regulation
    Trends in Cell Biology, Vol. 15, No. 5. (May 2005), pp. 251-258.
    by Ricardo Almeida, Robin C Allshire
    posted to mirna ncrna regulation rna silencing by eskay on 2008-08-15 16:23:29 as *****
  • Exploration of Small RNAs
    PLoS Genetics, Vol. 4, No. 1. (1 January 2008), e22.
    by Hideya Kawaji, Yoshihide Hayashizaki
    posted to ncrna review by eskay on 2008-08-15 16:03:11 as *** along with 1 person GeeSharpMinor
  • Unveiling substrate RNA binding to H/ACA RNPs: one side fits all
    Current Opinion in Structural Biology, Vol. 18, No. 1. (February 2008), pp. 78-85.
    by Hong Li
    posted to binding haca rnp snorna by eskay on 2008-08-15 16:01:59 as ****
  • Controlling mRNA stability and translation with small, noncoding RNAs
    Current Opinion in Microbiology, Vol. 7, No. 2. (April 2004), pp. 140-144.
    by Gisela Storz, Jason A Opdyke, Aixia Zhang
    posted to ecoli ncrna srna by eskay on 2008-08-15 14:34:57 as *** along with 1 person danadewey
  • MOLECULAR BIOLOGY: Glimpses of a Tiny RNA World
    Science, Vol. 294, No. 5543. (26 October 2001), pp. 797-799.
    by Gary Ruvkun
  • Host Immune System Gene Targeting by a Viral miRNA.
    Science, Vol. 317, No. 5836. (20 July 2007), pp. 376-381.
  • MicroRNAs expressed by herpes simplex virus 1 during latent infection regulate viral mRNAs
    Nature (02 July 2008)
    by Jennifer L Umbach, Martha F Kramer, Igor Jurak, Heather W Karnowski, Donald M Coen, Bryan R Cullen
    posted to mirna regulation by eskay on 2008-08-13 20:56:45 as *** along with 1 person tmmurali
  • Global single-cell cDNA amplification to provide a template for representative high-density oligonucleotide microarray analysis.
    Nat Protoc, Vol. 2, No. 3. (2007), pp. 739-752.
    posted to amplification by eskay on 2008-08-13 19:54:20 as * along with 2 people jyuh bakakaj
  • High-fidelity mRNA amplification for gene profiling
    Nat Biotech, Vol. 18, No. 4. (April 2000), pp. 457-459.
    by Ena Wang, Lance D Miller, Galen A Ohnmacht, Edison T Liu, Francesco M Marincola
    posted to amplification by eskay on 2008-08-13 18:50:41 as *
  • CELL SAMPLING: Laser Capture Microdissection: Molecular Analysis of Tissue
    Science, Vol. 278, No. 5342. (21 November 1997), pp. 1481-1483.
    by Robert F Bonner, Michael Emmert-Buck, Kristina Cole, Thomas Pohida, Rodgrigo Chuaqui, Seth Goldstein, Lance A Liotta
    posted to capture laser microdissection by eskay on 2008-08-13 18:33:50 as *
  • Laser capture microdissection.
    Science, Vol. 274, No. 5289. (8 November 1996), pp. 998-1001.
    by MR Emmert-Buck, RF Bonner, PD Smith, RF Chuaqui, Z Zhuang, SR Goldstein, RA Weiss, LA Liotta
  • Representation is faithfully preserved in global cDNA amplified exponentially from sub-picogram quantities of mRNA.
    Nat Biotechnol, Vol. 20, No. 9. (September 2002), pp. 940-943.
    by NN Iscove, M Barbara, M Gu, M Gibson, C Modi, N Winegarden
    posted to amplification microarrays by eskay on 2008-06-17 21:28:39 as **** along with 1 person miguel
  • A method for gene expression analysis by oligonucleotide arrays from minute biological materials
    Analytical Biochemistry, Vol. 331, No. 2. (15 August 2004), pp. 329-339.
    by Wan Ji, Wenli Zhou, Keqin Gregg, Klaus Lindpaintner, Sara Davis, Scott Davis
    posted to microarrays by eskay on 2008-06-17 21:28:19 as ***
  • Evaluation of procedures for amplification of small-size samples for hybridization on microarrays
    Genomics, Vol. 83, No. 3. (March 2004), pp. 508-517.
    by Sandra Klur, Karen Toy, Mickey P Williams, Ulrich Certa
    posted to amplification microarrays by eskay on 2008-06-17 21:27:58 as ***
  • Chemistry across scales: from molecules to cells
    Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 365, No. 1861. (15 December 2007), pp. 2921-2934.
    by Sophia N Yaliraki, Mauricio Barahona
    posted to biology systems by eskay on 2008-06-12 14:58:47 as **
  • Chemical genomics: a challenge for de novo drug design
    Molecular Biotechnology, Vol. 37, No. 3. (11 November 2007), pp. 237-245.
    by P Dean
    posted to design drug review by eskay on 2008-06-12 14:57:44 as **
  • Logic functions of the genomic cis-regulatory code.
    Proc Natl Acad Sci U S A, Vol. 102, No. 14. (5 April 2005), pp. 4954-4959.
    by S Istrail, EH Davidson
  • Genome-wide mapping of allele-specific protein-DNA interactions in human cells
    Nature Methods, Vol. 5, No. 4. (16 March 2008), pp. 307-309.
    by Nathaniel D Maynard, Jing Chen, Rhona K Stuart, Jian-Bing Fan, Bing Ren
    posted to binding chip snp by eskay on 2008-05-26 15:17:46 as ** along with 3 people zwang jyuh inesdesantiago
  • Mapping of Small RNAs in the Human ENCODE Regions
    The American Journal of Human Genetics, Vol. 82, No. 4. (11 April 2008), pp. 971-981.
    by Christelle Borel, Maryline Gagnebin, Corinne Gehrig, Evgenia V Kriventseva, Evgeny M Zdobnov, Stylianos E Antonarakis
    posted to encode ncrna by eskay on 2008-05-26 15:14:57 as ***
  • Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes
    Nature (10 April 2008)
    by Toshiaki Watanabe, Yasushi Totoki, Atsushi Toyoda, Masahiro Kaneda, Satomi Kuramochi-Miyagawa, Yayoi Obata, Hatsune Chiba, Yuji Kohara, Tomohiro Kono, Toru Nakano, Azim M Surani, Yoshiyuki Sakaki, Hiroyuki Sasaki
    posted to ncrna by eskay on 2008-05-26 15:12:02 as ** along with 3 people rschulz gjuggler inesdesantiago
  • Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes
    Nature (10 April 2008)
    by Oliver H Tam, Alexei A Aravin, Paula Stein, Angelique Girard, Elizabeth P Murchison, Sihem Cheloufi, Emily Hodges, Martin Anger, Ravi Sachidanandam, Richard M Schultz, Gregory J Hannon
    posted to ncrna pseudogene by eskay on 2008-05-26 15:10:27 as *** along with 3 people gjuggler rschulz inesdesantiago
  • Transposable elements and the evolution of regulatory networks.
    Nat Rev Genet (27 March 2008)
    by Cédric Feschotte
  • Opposition to transgenic technologies: ideology, interests and collective action frames
    Nature Reviews Genetics, Vol. 9, No. 6., pp. 458-463.
    by Ronald J Herring
    posted to random by eskay on 2008-05-26 14:53:34 as ** along with 1 person dchughes
  • Comprehensive analysis of affymetrix exon arrays using BioConductor.
    PLoS computational biology, Vol. 4, No. 2. (February 2008)
    by MJ Okoniewski, CJ Miller
    posted to bioconductor microarrays by eskay on 2008-05-26 14:48:57 as *** along with 2 people jfr chrisamiller
  • Evolutionary patterns in the sequence and structure of transfer RNA: early origins of archaea and viruses.
    PLoS computational biology, Vol. 4, No. 3. (March 2008)
    posted to evolution trna by eskay on 2008-05-26 14:48:00 as **
  • Statistical modeling of transcription factor binding affinities predicts regulatory interactions.
    PLoS Comput Biol, Vol. 4, No. 3. (March 2008)
    by T Manke, HG Roider, M Vingron
  • A semi-supervised method for predicting transcription factor-gene interactions in Escherichia coli.
    PLoS computational biology, Vol. 4, No. 3. (March 2008)
    by J Ernst, QK Beg, KA Kay, G Balázsi, ZN Oltvai, Z Bar-Joseph
    posted to factor network transcription by eskay on 2008-05-26 14:42:36 as ** along with 1 person xili03
  • Genome-wide prediction of SH2 domain targets using structural information and the FoldX algorithm.
    PLoS computational biology, Vol. 4, No. 4. (April 2008)
    posted to binding domain prediction by eskay on 2008-05-26 14:30:24 as ** along with 2 people cabbagesofdoom kgutwin
  • A generalized allosteric mechanism for cis-regulated cyclic nucleotide binding domains.
    PLoS computational biology, Vol. 4, No. 4. (April 2008)
    by AP Kornev, SS Taylor, LF Ten Eyck
    posted to binding domain by eskay on 2008-05-26 14:29:43 as **
  • Implementing arithmetic and other analytic operations by transcriptional regulation.
    PLoS computational biology, Vol. 4, No. 4. (April 2008)
    by SM Cory, TJ Perkins
  • A Structure-Based Flexible Search Method for Motifs in RNA
    Journal of Computational Biology, Vol. 14, No. 7. (2007), pp. 908-926.
    by Isana V Lublinsky, Michal Z Ukelson, Danny Barash, Klara Kedem
    posted to motifs ncrna rna structure by eskay on 2008-05-26 14:20:23 as ****
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